SustainPineDB

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Assembly info
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ECs
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Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene9905

Length: 379 nt

UniGene Fasta

>biog2_v2.0_unigene9905
ATGGGATTGTGAATGGAAGGCACAAGCCGGCAATGTTTGGTTGCATCATTTGATTGGACTTGCAGTGGAATCTGTAAATCTGTTGAAAGGTTAAAAGAGGTGCATCGTACCTGCAGTGAAGGAGATGGCGCAGTGTGGAACACATTAATTTGATTCCTCTGCATATATTATTTATGGCATGCTTCTCCCTTAAAGAAACTTTGCAATGAGATTGACACGTATATAAAGAGCCATCAAGTCAACATAGTTTTTTGATAACTTTCAAAATGGTGTTCTTAACAGGAATAGGTAATGGTTAGTGGTGAAAATGAGATAGGATTAGAATTATGTGGAAGAAGAATGAAAGAATAATTCTTATTTTGGTAGGTTTTGTATTCTT

Ace file of the UniGene biog2_v2.0_unigene9905

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene17125	3/3

Source	Descriptions	Term	Type	Identity
AutoFact	pfam01762, Galactosyl_T, Galactosyltransferase	-	-	28%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	97%
Blast2go	glycosyltransferase-like protein	-	-	84%

Source	GOs	Term	Type	e value	Identity
Blast2go	cell part	GO:0044464	Cellular Component	0.0	84%

Source	InterPros	Term	Type	Identity
Sma3	GPCR, rhodopsin-like, 7TM	IPR000276	-	-
Sma3	RNA recognition motif domain	IPR000504	-	-
Sma3	Glycosyl transferase, family 31	IPR002659	-	-
Sma3	2Fe-2S ferredoxin, iron-sulphur binding site	IPR006058	-	-
Sma3	Nucleotide-binding, alpha-beta plait	IPR012677	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: D5A8P6

Fln msg: Unexpected stop codon in the beginning of your sequence, your sequence is shorter than subject: 51 - 246

Fln protein: MGL*MEGTSRQCLVASFDWTCSGICKSVERLKEVHRTCSEGDGAVWNTLI*

Protein Length: 52

Fln nts: ATGGGATTGTGAATGGAAGGCACAAGCCGGCAATGTTTGGTTGCATCATTTGATTGGACTTGCAGTGGAATCTGTAAATCTGTTGAAAGGTTAAAAGAGGTGCATCGTACCTGCAGTGAAGGAGATGGCGCAGTGTGGAACACATTAATTTGA___TTCCTCTGCATATATTATTTATGGCATGCTTCTCCCTTAAAGAAACTTTGCAATGAGATTGACACGTATATAAAGAGCCATCAAGTCAACATAGTTTTTTGATAACTTTCAAAATGGTGTTCTTAACAGGAATAGGTAATGGTTAGTGGTGAAAATGAGATAGGATTAGAATTATGTGGAAGAAGAATGAAAGAATAATTCTTATTTTGGTAGGTTTTGTATTCTT

Fln Alignment:

biogeco2_mira_c5751___VASFDWTCSGICKSVERLKEVHRTCSEGDGAVWNTLI
D5A8P6_________________VASFDWTCSGICKSVERLKEVHRTCSEGDGAVWSTLI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain