SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene9663

Length: 583 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene9663 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene1050	4/4

Source	Descriptions	Term	Type	Identity
AutoFact	ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RUJ7_RICCO	-	-	51%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	88%
Blast2go	atp binding	-	-	71%

Source	ECs	Term	Type	e value	Identity
Blast2go	Adenosinetriphosphatase.	EC:3.6.1.3	-	0.0	71%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Purine metabolism	00230		0.0	71%

Source	GOs	Term	Type	e value	Identity
Blast2go	ATPase activity	GO:0016887	Molecular Function	0.0	71%
Blast2go	ATP binding	GO:0005524	Molecular Function	0.0	71%

Source	InterPros	Term	Type	Identity
Sma3		IPR001984	-	-
Sma3	AAA+ ATPase domain	IPR003593	-	-
Sma3	ATPase, AAA-type, core	IPR003959	-	-
Sma3	ATPase, AAA-type, conserved site	IPR003960	-	-
Sma3	Retrotransposon gag protein	IPR005162	-	-
Sma3	Adenosine/AMP deaminase active site	IPR006650	-	-

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
470	66	33			0.997476
472	66	33			0.997453

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain