SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene9124

Length: 705 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene9124 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene11234	3/3

Source	Descriptions	Term	Type	Identity
AutoFact	TCP domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJD1_MALDO	-	-	87%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	40%
Blast2go	t-complex protein 1 subunit beta	-	-	93%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring phosphorous-containing groups, Protein-serine/threonine kinases.	EC:2.7.11.-	-	0.0	93%

Source	GOs	Term	Type	Identity
Blast2go	protein folding	GO:0006457	Biological Process	93%
Blast2go	protein phosphorylation	GO:0006468	Biological Process	93%
Blast2go	ATP binding	GO:0005524	Molecular Function	93%
Blast2go	unfolded protein binding	GO:0051082	Molecular Function	93%
Blast2go	protein serine/threonine kinase activity	GO:0004674	Molecular Function	93%
Blast2go	cytoplasm	GO:0005737	Cellular Component	93%
Blast2go	anchored to plasma membrane	GO:0046658	Cellular Component	93%
Blast2go	cell wall	GO:0005618	Cellular Component	93%

Source	InterPros	Term	Type	Identity
Sma3	T-complex protein 1, beta subunit	IPR012716	-	-
Sma3	Chaperone, tailless complex polypeptide 1	IPR017998	-	-
Sma3	Chaperonin TCP-1, conserved site	IPR002194	-	-
Sma3	Chaperonin Cpn60/TCP-1	IPR002423	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-

Full-Lengther Next Prediction

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain