SustainPineDB

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Assembly info
Unigenes
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ECs
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Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene8881

Length: 446 nt

UniGene Fasta

>biog2_v2.0_unigene8881
ACCTCTTTCTGAGGGAATACCAATATTTCCTGGGTCATATATTACACATTCACTTCAAGTGGAGGGTTTGCGAGGAATTGTAACTGTTCCTGCTAGGCTTGAGTCTACATGTTTGGTCTTTGTTTACGGTGTTGATATCTTCTACACAAGGACTGCGCCTTCTCGGACATATGATTCTCTGACTGAGGACTTTAGTTATGCTCTTCTTCTCATAACTATCTTTGCCCTTGTCATAGCAATTATTGTAACATGGGTTTTATCTGAGCAGAAAGAACTGAAAGAGAAGTGGAGGTAAGATCAATGTACTTCTTGTCATTGCAGTTTTGTTAGTGATACTAATCTTATATCACAGATGTCCAAGGAAGAATGGACAAGAATCATTTGTTAAGCATCATTTTGTTTTCTAAGCATTTTCTTTGTTATTTGAATTTCCAGATTGGGTTCAA

Ace file of the UniGene biog2_v2.0_unigene8881

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene845	3/3

Source	Descriptions	Term	Type	Identity
AutoFact	DUF1620 domain containing protein	-	-	40%
FL-Next	tr=Catalytic, putative; Ricinus communis (Castor bean).	-	-	75%
Blast2go	uncharacterized protein kiaa0090 homolog	-	-	75%

Source	GOs	Term	Type	Identity
Blast2go	catalytic activity	GO:0003824	Molecular Function	75%
Blast2go	vacuolar membrane	GO:0005774	Cellular Component	75%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	75%
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	75%
Blast2go	plasma membrane	GO:0005886	Cellular Component	75%

Source	InterPros	Term	Type	Identity
Sma3	Quinonprotein alcohol dehydrogenase-like	IPR011047	-	-
Sma3	Domain of unknown function DUF1620	IPR011678	-	-
Sma3	Pyrrolo-quinoline quinone beta-propeller repeat	IPR018391	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: tr_plants

Fln subject: B9RS37

Fln msg: your sequence is shorter than subject: 98 - 983

Fln protein: PLSEGIPIFPGSYITHSLQVEGLRGIVTVPARLESTCLVFVYGVDIFYTRTAPSRTYDSLTEDFSYALLLITIFALVIAIIVTWVLSEQKELKEKWR*

Protein Length: 99

Fln nts: ACCTCTTTCTGAGGGAATACCAATATTTCCTGGGTCATATATTACACATTCACTTCAAGTGGAGGGTTTGCGAGGAATTGTAACTGTTCCTGCTAGGCTTGAGTCTACATGTTTGGTCTTTGTTTACGGTGTTGATATCTTCTACACAAGGACTGCGCCTTCTCGGACATATGATTCTCTGACTGAGGACTTTAGTTATGCTCTTCTTCTCATAACTATCTTTGCCCTTGTCATAGCAATTATTGTAACATGGGTTTTATCTGAGCAGAAAGAACTGAAAGAGAAGTGGAGGTAA___GATCAATGTACTTCTTGTCATTGCAGTTTTGTTAGTGATACTAATCTTATATCACAGATGTCCAAGGAAGAATGGACAAGAATCATTTGTTAAGCATCATTTTGTTTTCTAAGCATTTTCTTTGTTATTTGAATTTCCAGATTGGGTTCAA

Fln Alignment:

biogeco2_mira_c4075___PLSEGIPIFPGSYITHSLQVEGLRGIVTVPARLESTCLVFVYGVDIFYTRTAPSRTYDSLTEDFSYALLLITIFALVIAIIVTWVLSEQKELKEKWR
B9RS37_________________PLTDSLPIMPQSYVTHALQVEGLRGIITVPAKLESTTLVFAYGVDLFFTRIAPSRTYDSLTEDFSYALLLLTIVALVVAIFATWILSEKKELRDKWR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain