SustainPineDB

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Assembly info
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Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene8755

Length: 368 nt

UniGene Fasta

>biog2_v2.0_unigene8755
ATGGGGACGAGCTGATTCATGTTTTGGGCTCTGAGCAATTTCTTTTGGTCCTTTTGGAATTTTTCCAACGTGGGAATCAATGCGATATTGGGCCTCTTTGGCTTTGGAGTGACACTCCATAAAGACTCAGAGCTGCGAGTTCTGCTAGGAGGATGTTAAGTACTCGTTAGCAGCGGGGAAAAAGCTTGTAAAATGTGTATAGATAGGTTGAACTGCTTCCATGGAGCTTATGCCAAGTTGATGGCTGCTGGGCATTCTTCTTGCAATTCTGGGAAAGGCAAGAGCCACTTAAGTCCCAATAAAATTGTCCATGGATTCAGTCTAAGTGAAAGGAAAGGCTAAGTCATCCCATGGAGGATTATCATGTT

Ace file of the UniGene biog2_v2.0_unigene8755

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene35125	4/4

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Protein phosphatase 2C-like [Medicago truncatula]	-	-	5.0e-11	50%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	51%
Blast2go	probable protein phosphatase 2c 10-like	-	-	8.80858e-19	72%

Source	InterPros	Term	Type	Identity
Sma3	Protein phosphatase 2C-like	IPR001932	-	-
Sma3		IPR014045	-	-
Sma3	Protein phosphatase 2C	IPR015655	-	-

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NV16

Fln msg: Overlapping hits, possible frame ERROR between 336 and 330, Distance to subject end: 231 aas, Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 59 - 298

Fln protein: MCIDRLNCFHGAYAKLMAAGHSSCNSGKGKSHLSPNKIVHGFSLSxxxxLSHPMEDYHV

Protein Length: 60

Fln nts: ATGGGGACGAGCTGATTCATGTTTTGGGCTCTGAGCAATTTCTTTTGGTCCTTTTGGAATTTTTCCAACGTGGGAATCAATGCGATATTGGGCCTCTTTGGCTTTGGAGTGACACTCCATAAAGACTCAGAGCTGCGAGTTCTGCTAGGAGGATGTTAAGTACTCGTTAGCAGCGGGGAAAAAGCTTGTAAA_-_ATGTGTATAGATAGGTTGAACTGCTTCCATGGAGCTTATGCCAAGTTGATGGCTGCTGGGCATTCTTCTTGCAATTCTGGGAAAGGCAAGAGCCACTTAAGTCCCAATAAAATTGTCCATGGATTCAGTCTAAGTxxxxxxxxxxxxCTAAGTCATCCCATGGAGGATTATCATGTT

Fln Alignment:

biogeco2_mira_c3859___KACKMCIDRLNCFHGAYAKLMAAGHSSCNSGKGKSHLSPNKIVHGFSLSxxxLSHPMEDYH
A9NV16_________________KSAEMCVH-----WGCFGKT-ATGVRSVNTGKGKSHRSPNKIVHGFSLVxxxSSHPMEDYH

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain