SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene8422

Length: 651 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene8422 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene164	4/4

Source	Descriptions	Term	Type	Identity
AutoFact	Hydroxycinnamoyl-CoA:shikimate hydroxycinnamoyltransferase n=2 Tax=Pinaceae RepID=A6Y879_PINRA	-	-	98%
FL-Next	tr=Hydroxycinnamoyl-CoA:shikimate hydroxycinnamoyltransferase; Pinus radiata (Monterey pine) (Pinus insignis).	-	-	100%
Blast2go	hydroxycinnamoyl shikimate quinate hydroxycinnamoyltransferase	-	-	87%

Source	ECs	Term	Type	e value	Identity
Blast2go	Shikimate O-hydroxycinnamoyltransferase.	EC:2.3.1.133	-	0.0	87%

Source	KEGGs	Term	Type	Identity
Blast2go	Phenylpropanoid biosynthesis	00940		87%
Blast2go	Flavonoid biosynthesis	00941		87%
Blast2go	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945		87%
Blast2go	Biosynthesis of phenylpropanoids	01061		87%
Blast2go	Biosynthesis of secondary metabolites	01110		87%
Blast2go	Anthranilate N-benzoyltransferase.	EC:2.3.1.144	-	87%

Source	GOs	Term	Type	e value	Identity
Blast2go	shikimate O-hydroxycinnamoyltransferase activity	GO:0047172	Molecular Function	0.0	87%
Blast2go	anthranilate N-benzoyltransferase activity	GO:0047672	Molecular Function	0.0	87%

Source	InterPros	Term	Type	e value	Identity
Sma3	Transferase	IPR003480	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
338	75		25		0.996481

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain