SustainPineDB

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene8278

Length: 521 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene8278 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene10082	3/3

Source	Descriptions	Term	Type	Identity
AutoFact	lecithine cholesterol acyltransferase-like protein [Medicago truncatula]	-	-	65%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	90%
Blast2go	phospholipid:diacylglycerol acyltransferase 1-like	-	-	83%

Source	ECs	Term	Type	e value	Identity
Blast2go	Phosphatidylcholine--sterol O-acyltransferase.	EC:2.3.1.43	-	0.0	83%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Glycerophospholipid metabolism	00564		0.0	83%
Blast2go	Phospholipid:diacylglycerol acyltransferase.	EC:2.3.1.158	-	0.0	83%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Glycerolipid metabolism	00561		0.0	83%

Source	GOs	Term	Type	Identity
Blast2go	lipid metabolic process	GO:0006629	Biological Process	83%
Blast2go	phosphatidylcholine-sterol O-acyltransferase activity	GO:0004607	Molecular Function	83%
Blast2go	phospholipid:diacylglycerol acyltransferase activity	GO:0046027	Molecular Function	83%

Source	InterPros	Term	Type	e value	Identity
Sma3	Lecithin:cholesterol/phospholipid:diacylglycerol acyltransferase	IPR003386	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LQP7

Fln msg: Warning!, your query overlaps and the subject is separated, your sequence is shorter than subject: 141 - 681

Fln protein: KEKKRNGRRWWCLDNCCWFIGWIVSIWWLLTVLYNALPQFVTDAITGPLPDPPGLKLKKEGLTxxxKGWRGKTRFNPSGMSTYIREYLHAHLQTY*KVVVPKVVLMLT*WETLL**RIS*E*QQVQMGKI*VEIKCILVF*

Protein Length: 142

Fln nts: GGAAGGAGAAGAAGAGGAATGGCAGGAGATGGTGGTGTCTGGACAATTGCTGTTGGTTCATAGGTTGGATAGTTTCAATCTGGTGGCTCTTGACAGTTCTTTATAATGCTCTTCCACAGTTTGTGACGGACGCCATCACTGGCCCTCTGCCAGACCCTCCCGGCCTCAAGTTAAAGAAGGAAGGCCTGACAxxxxxxxxxAAAGGCTGGCGAGGGAAAACTAGATTTAATCCTTCAGGCATGTCAACTTATATAAGGGAGTACCTCCATGCCCACCTGCAAACATATTAGAAGGTCGTGGTACCCAAAGTGGTGCTCATGTTGACATAATGGGAAACTTTGCTTTGATAGAGGATATCATAAGAGTAGCAGCAGGTGCAAATGGGGAAGATATAGGTGGAGATCAAGTGTATTCTGGTATTCTAG___AATGGTCTGAGAAGATTAAACTAAAGCTATAAAGTGTTCACATTATTTGTGGCATTTTCTGATGCATCTTTTACCACAAAAATGTTCCAACATATAAT

Fln Alignment:

biogeco2_mira_c3019___KEKKRNGRRWWCLDNCCWFIGWIVSIWWLLTVLYNALPQFVTDAITXXXXXXXXXXXXXXXLTVHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTKGWRGKTRFNPSGMSTYIREYLHA
B8LQP7_________________KDKKRNGSKWWCLDNCCWFIGWIISMWWLLTVLYNALPQFVTDAITGPLPDSPGLKLKKEGLTVHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAKAWRGKTRFNPSGMSTYIREYLHA

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain