SustainPineDB

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Assembly info
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Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene8209

Length: 279 nt

UniGene Fasta

>biog2_v2.0_unigene8209
TGCTGACGCATTAGCATTGGATATATTGATTAATACTTTCTTGGGCTTGAACTCAGATTATGTTGGTATTAAACAACTTGTTTTTGGTGGAGCACGCTTTGGGGATTGGGAACAAGGCATGACATCTGTTGAATATGGATATAAAGTTTACAGAATTTGAACTCACTTGTACATGAGATTCCTAGATCACAGGCAGGTATTCCATTTTCAATATAGCACGTGTTGTTCTCAATTGGAGAATGAAACGGCCACAAGCATTAACATCTGGAGCCTTTGAAG

Ace file of the UniGene biog2_v2.0_unigene8209

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene10623	4/4

Source	Descriptions	Term	Type	Identity
AutoFact	DUF3531 domain containing protein	-	-	43%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	57%
Blast2go	uncharacterized protein	-	-	76%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NZ41

Fln msg: your sequence is shorter than subject: 53 - 276

Fln protein: ADALALDILINTFLGLNSDYVGIKQLVFGGARFGDWEQGMTSVEYGYKVYRI*

Protein Length: 54

Fln nts: TGCTGACGCATTAGCATTGGATATATTGATTAATACTTTCTTGGGCTTGAACTCAGATTATGTTGGTATTAAACAACTTGTTTTTGGTGGAGCACGCTTTGGGGATTGGGAACAAGGCATGACATCTGTTGAATATGGATATAAAGTTTACAGAATTTGA___ACTCACTTGTACATGAGATTCCTAGATCACAGGCAGGTATTCCATTTTCAATATAGCACGTGTTGTTCTCAATTGGAGAATGAAACGGCCACAAGCATTAACATCTGGAGCCTTTGAAG

Fln Alignment:

biogeco2_mira_c2918___ADALALDILINTFLGLNSDYVGIKQLVFGGARFGDWEQGMTSVEYGYKVYRI
A9NZ41_________________SDPLMLDVLINALQSLSSDYIGIKNLVFGGKHWGKWKEGSNSVEDGYKVCKI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain