SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene7948

Length: 584 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene7948 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene30003	5/5

Source	Descriptions	Term	Type	Identity
AutoFact	RNA polymerase I specific transcription initiation factor RRN3 protein [Arabidopsis thaliana] gb\|AAM20140.1\| unknown protein [Arabidopsis thaliana] gb\|AAN13210.1\| unknown protein [Arabidopsis thaliana] gb\|AEC09018.1\| RNA polymerase I specific transcriptio	-	-	37%
FL-Next	tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss).	-	-	40%
Blast2go	rna polymerase i-specific transcription initiation factor rrn3-like	-	-	59%

Source	InterPros	Term	Type	e value	Identity
Sma3	Phosphotransferase system, HPr serine phosphorylation site	IPR002114	-	0.0	-
Sma3	RNA polymerase I specific transcription initiation factor RRN3	IPR007991	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
401	66		33		0.997456

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain