SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene7867

Length: 741 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene7867 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene18339	4/5
SustainPine v2.0	sp_v2.0_unigene26788	1/5

Source	Descriptions	Term	Type	e value	Identity
AutoFact	small subunit ribosomal protein S6 [Arabidopsis thaliana] dbj\|BAB01802.1\| unnamed protein product [Arabidopsis thaliana] gb\|AAM67031.1\| unknown [Arabidopsis thaliana] dbj\|BAC42712.1\| unknown protein [Arabidopsis thaliana] gb\|AAO50729.1\| unknown protein [A	-	-	8.0e-28	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	93%
Blast2go	small subunit ribosomal protein s6	-	-	0.0	81%

Source	InterPros	Term	Type	e value	Identity
Sma3	Translation elongation factor EF1B/ribosomal protein S6	IPR014717	-	0.0	-

Full-Lengther Next Prediction

SSRs (tot: 1)

Start position	End position	Sequence	Length
268	281	TCA TCA TCA TCA TC	14

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain