SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene7687

Length: 648 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene7687 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene9370	6/6

Source	Descriptions	Term	Type	Identity
AutoFact	[F] COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain	-	-	38%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	96%
Blast2go	phosphoribosylformylglycinamidine synthase	-	-	86%

Source	ECs	Term	Type	e value	Identity
Blast2go	Phosphoribosylformylglycinamidine synthase.	EC:6.3.5.3	-	0.0	86%

Source	KEGGs	Term	Identity
Blast2go	Purine metabolism	00230	86%
Blast2go	Metabolic pathways	01100	86%
Blast2go	Biosynthesis of secondary metabolites	01110	86%

Source	GOs	Term	Type	Identity
Blast2go	microgametogenesis	GO:0055046	Biological Process	86%
Blast2go	'de novo' IMP biosynthetic process	GO:0006189	Biological Process	86%
Blast2go	ATP binding	GO:0005524	Molecular Function	86%
Blast2go	transferase activity	GO:0016740	Molecular Function	86%
Blast2go	phosphoribosylformylglycinamidine synthase activity	GO:0004642	Molecular Function	86%
Blast2go	mitochondrion	GO:0005739	Cellular Component	86%
Blast2go	chloroplast stroma	GO:0009570	Cellular Component	86%

Source	InterPros	Term	Type	Identity
Sma3	AIR synthase-related protein	IPR000728	-	-
Sma3	AIR synthase-related protein, C-terminal	IPR010918	-	-
Sma3	Glutamine amidotransferase type 1	IPR017926	-	-
Sma3	Phosphoribosylformylglycinamidine synthase	IPR010073	-	-

Full-Lengther Next Prediction

SNPs (tot: 4)

Position	A %	C %	G %	Probability
351	50		50	1.0
426	33		66	0.997471
474		50	50	1.0
483	25		50	0.995533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain