SustainPineDB

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Assembly info
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Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene7473

Length: 478 nt

UniGene Fasta

>biog2_v2.0_unigene7473
ATGGGAGATCCAAAGACATTCCAAAAGGTAAAATTTGTTTACCCGAAGAGTGGGGAAAGTACCAACCTTCTGGAAGAAGTTTTTGACATGGATACGCTTGAATCATCATTCGGAGGAAAGAACAATTACCAATATGACCATGGGGAATTCTCGAAACTTATGCGGCAAGATGATATAAAGACTGCAGAGTACTGGGCAATGGGAGATGAGGTCACTGAGATGAACGGTAATTCATCATCAAACCATGACTTGAAAGTTGATGGTGATGCTACAACAGAAAGCTGATGGGCGTATCAACTGCATTTCTTTTTTTGAATAGATTCTTGATTCTATGACTACAAGTGTTTTTATTTGGCATGCCCCATTTCAACCTAGCGTCTTATGATAACGTCTTTAATTGTTCTAATTGGAAATGTATCAAAACAAGCGGTTTCCATCTGTTAGAAATAACCATACGTAGAAAAAATATTCAATCATA

Ace file of the UniGene biog2_v2.0_unigene7473

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene16983	5/5

Source	Descriptions	Term	Type	Identity
AutoFact	Transporter, putative n=1 Tax=Ricinus communis RepID=B9R7T6_RICCO	-	-	70%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	85%
Blast2go	like phosphatidylinositol transfer-like protein	-	-	80%

Source	InterPros	Term	Type	e value	Identity
Sma3	CRAL-TRIO domain	IPR001251	-	0.0	-
Sma3		IPR008273	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NZ88

Fln msg: your sequence is shorter than subject: 95 - 294

Fln protein: MGDPKTFQKVKFVYPKSGESTNLLEEVFDMDTLESSFGGKNNYQYDHGEFSKLMRQDDIKTAEYWAMGDEVTEMNGNSSSNHDLKVDGDATTES*

Protein Length: 96

Fln nts: ATGGGAGATCCAAAGACATTCCAAAAGGTAAAATTTGTTTACCCGAAGAGTGGGGAAAGTACCAACCTTCTGGAAGAAGTTTTTGACATGGATACGCTTGAATCATCATTCGGAGGAAAGAACAATTACCAATATGACCATGGGGAATTCTCGAAACTTATGCGGCAAGATGATATAAAGACTGCAGAGTACTGGGCAATGGGAGATGAGGTCACTGAGATGAACGGTAATTCATCATCAAACCATGACTTGAAAGTTGATGGTGATGCTACAACAGAAAGCTGA___TGGGCGTATCAACTGCATTTCTTTTTTTGAATAGATTCTTGATTCTATGACTACAAGTGTTTTTATTTGGCATGCCCCATTTCAACCTAGCGTCTTATGATAACGTCTTTAATTGTTCTAATTGGAAATGTATCAAAACAAGCGGTTTCCATCTGTTAGAAATAACCATACGTAGAAAAAATATTCAATCATA

Fln Alignment:

biogeco2_mira_c1513___DPKTFQKVKFVYPKSGESTNLLEEVFDMDTLESSFGGKNNYQYDHGEFSKLMRQDDIKTAEYWAMGDEVTEMNGNSSSNHDLKVDGDATTES
A9NZ88_________________DPKTFQKVKFVYSKSGESSSLLEEVFDMDKLESSFGGKNNHQYDHAEFSKLMQQDDVKTAEYWAMGDEVTEMNGNSTSNHDLKVNGNATAQS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain