SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene6428

Length: 1004 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene6428 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene3635	14/14

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative DnaJ protein [Camellia sinensis]	-	-	6.0e-28	40%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	85%
Blast2go	heat shock protein binding protein	-	-	0.0	68%

Source	GOs	Term	Type	Identity
Blast2go	protein folding	GO:0006457	Biological Process	68%
Blast2go	response to stress	GO:0006950	Biological Process	68%
Blast2go	heat shock protein binding	GO:0031072	Molecular Function	68%
Blast2go	unfolded protein binding	GO:0051082	Molecular Function	68%
Blast2go	chloroplast stroma	GO:0009570	Cellular Component	68%
Blast2go	nucleus	GO:0005634	Cellular Component	68%

Source	InterPros	Term	Type	Identity
Sma3	Heat shock protein DnaJ, N-terminal	IPR001623	-	-
Sma3		IPR015609	-	-
Sma3	Heat shock protein DnaJ	IPR003095	-	-

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
414		33	66		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain