SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene6361

Length: 944 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene6361 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene14019	11/13
SustainPine v2.0	sp_v2.0_unigene23759	1/13
SustainPine v2.0	sp_v2.0_unigene23923	1/13

Source	Descriptions	Term	Type	e value	Identity
AutoFact	17.7 kDa heat shock protein n=1 Tax=Helianthus annuus RepID=Q39930_HELAN	-	-	1.0e-37	54%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	86%
Blast2go	protein	-	-	0.0	72%

Source	InterPros	Term	Type	e value	Identity
Sma3	Heat shock protein Hsp20	IPR002068	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 11)

Position	A %	C %	G %	T %	Probability
490		66	33		0.997452
491		66	33		0.997452
492	66		33		0.997452
494		66	33		0.997452
495			66	33	0.997452
553	33		66		0.997452
649	85	14			0.993533
651	85	14			0.993533
652	85	14			0.993533
700	33	66			0.997452
796		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain