SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene6357

Length: 870 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene6357 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene5284	10/13
SustainPine v2.0	sp_v2.0_unigene60413	3/13

Source	Descriptions	Term	Type	Identity
AutoFact	Maintenance of ploidy protein MOB1 (MPS1 binder 1) n=16 Tax=Embryophyta RepID=Q9FHI1_ARATH	-	-	93%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	100%
Blast2go	mps one binder kinase activator-like 1a	-	-	96%

Source	GOs	Term	Type	Identity
Blast2go	phosphorylation	GO:0016310	Biological Process	96%
Blast2go	kinase activity	GO:0016301	Molecular Function	96%
Blast2go	nucleus	GO:0005634	Cellular Component	96%

Source	InterPros	Term	Type	e value	Identity
Sma3	Mob1/phocein	IPR005301	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 4)

Position	A %	C %	G %	T %	Probability
330	33			66	1.0
370	42			57	1.0
454		80		20	0.995493
491	75		25		0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain