SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene5120

Length: 805 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene5120 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene16127	16/16

Source	Descriptions	Term	Type	Identity
AutoFact	GILT domain-containing protein [Arabidopsis thaliana] gb\|AAK83650.1\| At1g07080/F10K1_15 [Arabidopsis thaliana] gb\|AAL06806.1\| At1g07080/F10K1_15 [Arabidopsis thaliana] gb\|AEE28075.1\| GILT domain-containing protein [Arabidopsis thaliana]	-	-	56%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	89%
Blast2go	gamma-interferon-inducible lysosomal thiol reductase	-	-	77%

Source	GOs	Term	Type	e value	Identity
Blast2go	vacuole	GO:0005773	Cellular Component	0.0	77%

Source	InterPros	Term	Type	e value	Identity
Sma3	Gamma interferon inducible lysosomal thiol reductase GILT	IPR004911	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	G %	T %	Probability
600		71		28	1.0
628		16		83	0.994512
631	16		83		0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain