SustainPineDB

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene5077

Length: 905 nt

UniGene Fasta

Ace file of the UniGene biog2_v2.0_unigene5077

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene16852	4/10
SustainPine v2.0	sp_v2.0_unigene21848	1/10
SustainPine v2.0	sp_v2.0_unigene29202	5/10

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	uncharacterized membrane protein at1g16860-like	-	-	70%

Source	InterPros	Term	Type	e value	Identity
Sma3	Peptidase S8/S53, subtilisin/kexin/sedolisin	IPR000209	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LR84

Fln msg: Distance to subject end: 255 aas, your sequence is shorter than subject: 255 - 510

Fln protein: MGTNSRISAHQLSNGLYVSGRPEQYKDKQPTMSSTAVPYTGGDIKKSGELGKMFDIPVESTSKMKKSGSFQKTPGQGHGSSNSGPLTSGGAPRSAFSASGPINSGGISRQNTGAGNNQGSKSGPLSGNLGRQMSQSGPLNRSGDMAVGPNPKAAPSSGKNSGPQSSAPPIARTNSGNLLPATGLITSGPISSGPLSSSGALKKVTSGPLDSSGAPVKIVSMNQNQAVSNLSNAEEYSFQKGFPKIIFWMVILVFI

Protein Length: 256

Fln nts: CTTGACAGTAGCTTGGAATTTGGTTTCAGAGATCCAATTTTGTGGACATAAACCCTAAATTGTCGACAGAATTACTGGAACTTCATCTCTTGCGAGCAATTTAGGCACACGGATAGAGAAAGAGAAGATCTGGTCGAAA_-_ATGGGAACCAATAGTAGGATTTCGGCGCACCAGCTTAGTAATGGACTGTATGTCTCCGGACGGCCGGAGCAGTACAAAGACAAGCAGCCGACGATGAGCTCCACGGCGGTGCCGTACACAGGAGGGGACATCAAGAAGTCTGGCGAGCTCGGTAAAATGTTCGACATTCCGGTTGAAAGTACGAGTAAGATGAAGAAATCCGGGTCTTTTCAGAAAACTCCAGGCCAAGGCCATGGAAGTTCTAATTCGGGACCTTTAACATCTGGCGGAGCTCCCCGCTCGGCTTTTTCGGCTTCGGGCCCTATAAACTCCGGCGGGATTTCACGGCAGAACACGGGCGCAGGTAATAATCAGGGCTCGAAGTCCGGACCTCTTTCCGGTAATCTGGGTCGGCAGATGTCCCAGTCCGGGCCCCTGAATCGAAGCGGAGATATGGCAGTCGGTCCAAATCCAAAAGCTGCACCTTCAAGTGGCAAGAATTCTGGTCCCCAGTCATCTGCTCCTCCTATTGCGAGGACAAACTCTGGTAATTTGCTTCCGGCAACAGGGCTTATAACATCGGGACCTATATCATCGGGTCCTTTATCGTCCTCCGGAGCATTGAAGAAGGTTACCTCTGGTCCCCTGGATTCTTCAGGCGCGCCTGTGAAGATCGTTAGTATGAATCAGAATCAAGCAGTGAGCAATCTTAGCAATGCCGAAGAATATTCCTTCCAGAAGGGATTCCCCAAGATCATATTTTGGATGGTCATCCTCGTGTTTATAA

Fln Alignment:

Contig5077___MGTNSRISAHQLSNGLYVSGRPEQYKDKQPTMSSTAVPYTGGDIKKSGELGKMFDIPVESTSKMKKSGSFQKTPGQGHGSSNSGPLTSGGAPRSAFSASGPINSGGISRQNTGAGNNQGSKSGPLSGNLGRQMSQSGPLNRSGDMAVGPNPKAAPSSGKNSGPQSSAPPIARTNSGNLLPATGLITXXXXXXXXXXXXXALKKVTSGPLDSSGAPVKIVSMNQNQAVSNLSNAEEYSFQKGFPKIIFWMVILVFI
B8LR84_________________MGTNSRISAHQLSNGLYVSGRPEQYKDKQPTMSSTAVPYTGGDIKKSGELGKMFDIPVESTNKMKKSGSFQKAPAQGHGTSNSGPLTSGGAPRSAFSASGPINPGGISRQSTGAGNSQGSKSGPLSGNLGRQISQSGPLNRSGDMAVGPNPKAAPSSGKNSGPQSSAPTIVRTNSGNLLPATGLITSGPISSGPLSSSGALKKTTSGPLDPSGAPVKIVSINQNQAVSNLSNAEEYSFQKGFPKIILWMVILVFI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain