SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene5066

Length: 915 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene5066 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene17439	14/14

Source	Descriptions	Term	Type	Identity
AutoFact	pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9	-	-	54%
FL-Next	sp=Endoglucanase 19; Arabidopsis thaliana (Mouse-ear cress).	-	-	51%
Blast2go	endo-beta- -glucanase	-	-	80%

Source	GOs	Term	Type	e value	Identity
Blast2go	catalytic activity	GO:0003824	Molecular Function	0.0	80%

Source	InterPros	Term	Type	Identity
Sma3	Glycoside hydrolase, family 9	IPR001701	-	-
Sma3	Six-hairpin glycosidase	IPR012341	-	-
Sma3	NADH:ubiquinone oxidoreductase, B12 subunit	IPR012576	-	-
Sma3	Glycoside hydrolase, family 9, active site	IPR018221	-	-
Sma3	WD40 repeat, conserved site	IPR019775	-	-

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain