SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene4898

Length: 939 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene4898 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene521	9/9

Source	Descriptions	Term	Type	Identity
AutoFact	exocyst subunit exo70 family protein B1 [Arabidopsis thaliana] dbj\|BAB10258.1\| leucine zipper protein [Arabidopsis thaliana] gb\|AAM19847.1\| AT5g58430/mqj2_20 [Arabidopsis thaliana] gb\|AAN33202.1\| At5g58430/mqj2_20 [Arabidopsis thaliana] gb\|AED97052.1\| exo	-	-	49%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	93%
Blast2go	protein	-	-	69%

Source	GOs	Term	Type	Identity
Blast2go	exocytosis	GO:0006887	Biological Process	69%
Blast2go	extracellular vesicular exosome	GO:0070062	Cellular Component	69%
Blast2go	plasma membrane	GO:0005886	Cellular Component	69%
Blast2go	exocyst	GO:0000145	Cellular Component	69%
Blast2go	cytosol	GO:0005829	Cellular Component	69%

Source	InterPros	Term	Type	e value	Identity
Sma3	Exo70 exocyst complex subunit	IPR004140	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
717			33	66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain