SustainPineDB

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene4837

Length: 1093 nt

UniGene Fasta

Ace file of the UniGene biog2_v2.0_unigene4837

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene26840	1/18
SustainPine v2.0	sp_v2.0_unigene32449	17/18

Source	Descriptions	Term	Type	Identity
AutoFact	Acetyl-CoA C-acetyltransferase protein n=3 Tax=asterids RepID=D3YN47_9ERIC	-	-	80%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	96%
Blast2go	acetyl- cytosolic 2	-	-	91%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Acyltransferases, Transferring groups other than amino-acyl groups.	EC:2.3.1.-	-	0.0	91%

Source	KEGGs	Term	Identity
Blast2go	Fatty acid biosynthesis	00061	91%
Blast2go	Tetracycline biosynthesis	00253	91%
Blast2go	Lysine degradation	00310	91%
Blast2go	Arginine and proline metabolism	00330	91%
Blast2go	Histidine metabolism	00340	91%
Blast2go	Tyrosine metabolism	00350	91%
Blast2go	Benzoate degradation	00362	91%
Blast2go	Lipopolysaccharide biosynthesis	00540	91%
Blast2go	Glycerophospholipid metabolism	00564	91%
Blast2go	Ether lipid metabolism	00565	91%
Blast2go	Glycosphingolipid biosynthesis - ganglio series	00604	91%
Blast2go	Toluene degradation	00623	91%
Blast2go	Naphthalene degradation	00626	91%
Blast2go	Aminobenzoate degradation	00627	91%
Blast2go	Ethylbenzene degradation	00642	91%
Blast2go	Butanoate metabolism	00650	91%
Blast2go	Methane metabolism	00680	91%
Blast2go	Limonene and pinene degradation	00903	91%
Blast2go	Diterpenoid biosynthesis	00904	91%
Blast2go	Carotenoid biosynthesis	00906	91%
Blast2go	Anthocyanin biosynthesis	00942	91%
Blast2go	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	91%
Blast2go	Isoquinoline alkaloid biosynthesis	00950	91%
Blast2go	Tropane, piperidine and pyridine alkaloid biosynthesis	00960	91%
Blast2go	Betalain biosynthesis	00965	91%
Blast2go	Biosynthesis of unsaturated fatty acids	01040	91%
Blast2go	Biosynthesis of type II polyketide backbone	01056	91%
Blast2go	Biosynthesis of terpenoids and steroids	01062	91%
Blast2go	Metabolic pathways	01100	91%
Blast2go	Biosynthesis of secondary metabolites	01110	91%

Source	GOs	Term	Type	e value	Identity
Blast2go	transferase activity, transferring acyl groups other than amino-acyl groups	GO:0016747	Molecular Function	0.0	91%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: C0PSI1

Fln msg: your sequence is shorter than subject: 258 - 404

Fln protein: GSLVDGMMKDGLWDVYNDIGMGVCAELCADNHNITREEQDNHAVQSFERGIDAQNSGAFAWEIVPVEVSGGRGKPSTVVDKDEGLGKFDAAKLRKLRPAFKEGGSVTAGNASTISDGAAALVLVSGEKALELGLQVIAKITGYADAAQAPELFTTAPALAIPKAISRAGLEASQIDYYEINEAFSVVALANQKILNLKPETVNVHGGAVSLGHPLGCSGARIMVTLLGVLRQRNGKYGVAGVCNGGGGASAVVIECM*

Protein Length: 259

Fln nts: ACGGATCTCTTGTCGATGGAATGATGAAAGACGGACTCTGGGATGTTTACAATGACATTGGCATGGGAGTATGTGCAGAGTTATGTGCAGATAATCATAACATAACAAGAGAAGAACAGGACAACCATGCAGTTCAGAGTTTCGAACGTGGAATTGATGCCCAGAACAGTGGTGCTTTTGCATGGGAAATAGTGCCGGTTGAGGTTTCCGGAGGTAGAGGAAAGCCTTCCACAGTTGTTGACAAAGATGAAGGCTTGGGGAAGTTTGATGCTGCAAAACTAAGAAAACTTAGACCAGCATTTAAAGAAGGTGGAAGTGTCACCGCGGGTAATGCTTCAACAATTAGTGATGGAGCAGCTGCTCTAGTGTTGGTGAGTGGAGAGAAGGCTTTGGAACTAGGATTACAAGTTATAGCAAAGATCACAGGATATGCTGATGCTGCACAGGCACCTGAGCTGTTTACAACTGCACCGGCTCTAGCCATACCAAAAGCTATTTCAAGGGCAGGCTTGGAGGCTTCACAAATTGACTACTATGAGATCAATGAAGCATTTTCTGTTGTGGCTCTTGCAAACCAGAAGATACTTAATCTCAAGCCTGAAACTGTAAATGTACATGGAGGAGCTGTGTCATTGGGGCATCCACTTGGGTGCAGTGGTGCTCGCATTATGGTCACACTTTTAGGGGTATTGAGGCAAAGGAATGGGAAGTATGGAGTTGCAGGAGTTTGCAATGGTGGTGGTGGAGCATCTGCAGTGGTTATAGAGTGCATGTAA___GCATCTGTTTTTGTGATCACTTAAAAGAAGTACGAGCCTCTTTGTGAAGACGTACTGATGGAAAGGTCATGTTTGTAGGAGACATAATTTATAGGAGTTTCTTATTATAATAACCAAGAAGTCAGATCCTGGGGACTCATGGTGTATAGTTGAGTATAATAGTCACTGTCATTAGTAATTTGGTGTGGTGCTGTTTGACCTGCCTTTCCTTTAGAGCAATTGATTCTTGAGGATGGAAGAGGTTATGCTGAGGCTCAAGAGATGATTGTTTGAGTTGTGGAAAAGCAAAAGGTTTCCAGATGTAGTCAGATAGTAAC

Fln Alignment:

Contig4837___GSLVDGMMKDGLWDVYNDIGMGVCAELCADNHNITREEQDNHAVQSFERGIDAQNSGAFAWEIVPVEVSGGRGKPSTVVDKDEGLGKFDAAKLRKLRPAFKEGGSVTAGNASTISDGAAALVLVSGEKALELGLQVIAKITGYADAAQAPELFTTAPALAIPKAISRAGLEASQIDYYEINEAFSVVALANQKILNLKPETVNVHGGAVSLGHPLGCSGARIMVTLLGVLRQRN
C0PSI1_________________GSLVDGMMKDGLWDVYNDYGMGVCGELCADSHNISREEQDNHAVQSFERGINAQNSGAFAWEIVPVEVSGGRGKPSTVVDKDEALGKFDAAKLRKLRPAFKEGGTVTAGNASTISDGAAALVLVSGEKALELGLQVIAKITGYADAAQAPELFTTAPSLAIPKAISRAGLEASQIDYYEINEAFSVVALANQKILDLKPETVNVHGGAVSLGHPLGCSGARIMVTLLGVLRQRN

SNPs (tot: 5)

Position	A %	G %	T %	Probability
464	20	80		0.995493
466		20	80	0.995493
467		20	80	0.995493
468	80	20		0.995493
595	80		20	0.995493

SSRs (tot: 1)

Start position	End position	Sequence	Length
734	745	TGG TGG TGG TGG	12

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain