SustainPineDB

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene4640

Length: 1034 nt

UniGene Fasta

Ace file of the UniGene biog2_v2.0_unigene4640

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene3386	17/17

Source	Descriptions	Term	Type	Identity
AutoFact	RecName: Full=Cytochrome P450 77A1; AltName: Full=CYPLXXVIIA1; AltName: Full=Cytochrome P-450EG6 emb\|CAA50647.1\| P450 hydroxylase [Solanum melongena]	-	-	51%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	89%
Blast2go	cytochrome p450	-	-	72%

Source	GOs	Term	Type	Identity
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	72%
Blast2go	heme binding	GO:0020037	Molecular Function	72%
Blast2go	monooxygenase activity	GO:0004497	Molecular Function	72%
Blast2go	electron carrier activity	GO:0009055	Molecular Function	72%
Blast2go	oxygen binding	GO:0019825	Molecular Function	72%

Source	InterPros	Term	Type	Identity
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Inorganic pyrophosphatase	IPR008162	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LLH0

Fln msg: your sequence is shorter than subject: 240 - 327

Fln protein: HGGANAYIDSLMKLELPEGRGKPTDEELVTLCSELLTAGTDTTATTLEWAMLRMVMHQDIQETLYQEICNVVGDRKVEDKDIDNLPYLNAVVKETLRRHPPGHFVLSHSVTEDCKLRGYDIPYQCNLEIYTAWMSFDPSIWPDPMTFNPQRFLDPNSEVDITGNKQVKMMPFGVGRRICPALGLGTLHINLILARMVQAFHWSCREGETLDLSEKFAFTVVMTNPLQACIKKRGARIGQ*

Protein Length: 241

Fln nts: ACATGGGGGCGCCAATGCATATATTGACTCGCTGATGAAGCTAGAGCTGCCGGAAGGGCGAGGGAAACCCACTGATGAAGAATTAGTTACCCTTTGTTCCGAGCTCCTGACCGCCGGAACTGACACAACAGCTACTACCTTGGAATGGGCAATGCTTCGCATGGTGATGCATCAAGATATTCAAGAGACGCTCTATCAAGAGATCTGCAATGTCGTGGGTGACAGGAAAGTGGAGGACAAGGACATTGACAACCTTCCATACTTGAACGCCGTGGTGAAGGAGACCCTGAGACGACACCCTCCGGGTCACTTCGTCCTGTCACACTCAGTCACAGAGGATTGCAAGCTCAGGGGCTACGACATTCCCTACCAATGCAATCTGGAGATTTACACGGCATGGATGTCGTTTGATCCGAGCATTTGGCCGGATCCCATGACTTTCAATCCCCAGCGATTCCTGGACCCGAATAGCGAAGTAGATATCACGGGCAACAAGCAGGTGAAGATGATGCCCTTTGGGGTGGGCCGGAGGATTTGCCCCGCCCTAGGGCTGGGGACCCTGCACATCAATCTTATTTTGGCCCGCATGGTGCAGGCCTTTCACTGGTCCTGCCGGGAAGGTGAGACTCTCGATCTCTCTGAGAAGTTTGCGTTTACTGTTGTAATGACGAATCCGCTCCAGGCATGCATTAAGAAAAGAGGAGCTCGTATTGGCCAGTAG___GGTCGAAATCCTAAATTGCTATTATTGTCGTATTGGCCAGTAGGGTCGAAATCCTAAATTGCCATTAGTGTCTGTTTCAATTATGCTCATATTAGCCGGTTGCTATCAATGTCTATTTCATATATCTTATATCTCCAACATCATCAGAGCTAGAAGCATTAGCTGCAGTTGCAGGTCGAGATCAAGATAGTTTTCTATTTGATCTGGTCGAAGGTCAGACCCTAAATTGACATCAATGTGTTGCAGGTCAGACCCTAAATTGCTACCAATGTCTATCTCAGATATATTATATGTATGTATGATCATGAATGAA

Fln Alignment:

Contig4640___GANAYIDSLMKLELPEGRGKPTDEELVTLCSEXXXXXXXXXXXXXEWAMLRMVMHQDIQETLYQEICNVVGDRKVEDKDIDNLPYLNAVVKETLRRHPPGHFVLSHSVTEDCKLRGYDIPYQCNLEIYTAWMSFDPSIWPDPMTFNPQRFLDPNSEVDITGNKQVKMMPFGVGRRICPALGLGTLHINLILARMVQAFHWSCREGETLDLSEKFAFTVVMTNPLQACIKKR
B8LLH0_________________GAHAYIDSLMNLELPEGRGKPTDEELVTLCSELLTAGTDTTSTALEWAMLRMVMHQDIQETLYQEICDVVGDRKVEGKDIENLPYLNAVVKETLRRHPPGHFVLSHAVTQDCQLRGYDIPYKANVEFYTAWMSFDPKIWPDPMTFNPRRFLDPGNEVDITGNKQVKMMPFGVGRRICPALGLGTLHINLILARMVQEFHWSCRDGETPDISEKFAFTVIMKNPLQASIKKR

SNPs (tot: 3)

Position	A %	C %	T %	Probability
160		83	16	0.994512
381		25	75	0.996473
1029	33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain