SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene4631

Length: 734 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene4631 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene9753	10/10

Source	Descriptions	Term	Type	Identity
AutoFact	Phenazine biosynthesis protein, putative n=1 Tax=Ricinus communis RepID=B9S449_RICCO	-	-	45%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	92%
Blast2go	phenazine biosynthesis protein	-	-	61%

Source	GOs	Term	Type	e value	Identity
Blast2go	biosynthetic process	GO:0009058	Biological Process	0.0	61%
Blast2go	catalytic activity	GO:0003824	Molecular Function	0.0	61%

Source	InterPros	Term	Type	e value	Identity
Sma3	Phenazine biosynthesis PhzC/PhzF protein	IPR003719	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	G %	T %	Probability
390	20			80	0.995493
429	83		16		0.994512
510		60		40	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain