SustainPineDB

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene4576

Length: 1174 nt

UniGene Fasta

Ace file of the UniGene biog2_v2.0_unigene4576

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene15513	9/10
SustainPine v2.0	sp_v2.0_unigene17066	1/10

Source	Descriptions	Term	Type	Identity
AutoFact	Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NUC9_PICSI	-	-	91%
FL-Next	sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	95%
Blast2go	probable fructose-bisphosphate aldolase chloroplastic-like	-	-	91%

Source	InterPros	Term	Type	e value	Identity
Sma3	Fructose-bisphosphate aldolase, class-I	IPR000741	-	0.0	-
Sma3	Aldolase-type TIM barrel	IPR013785	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: C0PS67

Fln msg: your sequence is shorter than subject: 342 - 378

Fln protein: INSRQLHRASRHARLARQREKKCRLHCPCGLENTEANRQAYRQLLVSAPGLGQYISGAILFEETLYQSSTEGKKIVDILVQQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRCAEYYKQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGEHGIERTNEVALKVWSEVFFYLAENNVLFEGILLKPSMVTPGAECKERASPETVAQYTLNLLRRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGRPENVDAAQKILLVRAKANSLAQLGKYSAEGESAESKEGMFVKGYTY*

Protein Length: 343

Fln nts: GGATAAATAGTAGGCAGCTCCATCGGGCGAGCAGACACGCGAGACTTGCCCGTCAAAGGGAAAAGAAGTGCCGATTGCATTGCCCCTGCGGGCTTGAGAACACGGAGGCGAACCGACAGGCATACAGGCAGCTGCTCGTCAGCGCGCCGGGTCTCGGACAGTACATCTCCGGCGCCATTCTCTTCGAGGAAACTCTGTACCAGTCCAGCACCGAAGGCAAGAAGATCGTAGACATCCTCGTGCAGCAGAACATAGTGCCCGGaATCAAAGTCGACAAGGGTCTGGTTCCTTTGGCTGGTTCAAACGACGAATCTTGGTGCCAAGGCCTAGACGGCCTCGCATCAAGGTGCGCTGAGTATTATAAGCAAGGAGCTCGCTTCGCCAAATGGCGTACAGTTGTGAGCATTCCCAACGGCCCCTCTGCTCTGGCCGTGAAAGAAGCTGCATGGGGTCTCGCCCGCTACGCGGCAATTGCTCAGGACAACGGTCTGGTTCCCATAGTGGAGCCAGAGATCCTGTTGGATGGAGAACACGGCATTGAGAGGACTAACGAAGTAGCGCTGAAGGTGTGGTCCGAGGTGTTCTTCTACTTAGCAGAGAACAACGTGCTGTTCGAAGGCATTCTGCTGAAGCCGAGCATGGTTACCCCTGGTGCCGAGTGTAAGGAGAGGGCCAGTCCCGAAACTGTTGCCCAATATACCCTGAACCTTCTCCGAAGAAGAGTTCCACCGGCCGTTCCTGGAATCATGTTCTTGTCTGGTGGGCAATCTGAGGTGGAGGCGACCTTGAACTTGAACGCGATGAACCAGGCGCCGAACCCGTGGCACGTATCATTCTCATATGCTCGTGCTCTGCAAAACACTTGCCTCAAGACATGGGGTGGCAGGCCCGAGAACGTGGACGCAGCCCAGAAGATCCTGCTGGTTCGGGCAAAGGCCAACTCCCTTGCACAGCTTGGCAAATACTCTGCTGAAGGCGAGTCTGCGGAGTCGAAGGAGGGAATGTTCGTGAAGGGCTACACTTATTAA___GCATACTAGTCCAGTGCAGTGGAGTCTAGTATAGTATGGTTGAAAAGCATAGTTACTAGTCCAGTGCAGTGGAGTCTAGTATAGTATGGTTGAAAAGCATAGCCACTAGTCCAGTGCGGTGGAGTCTAGTATAGTATGGTTGAAAA

Fln Alignment:

Contig4576___GLENTEANRQAYRQLLVSAPGLGQYISGAILFEETLYQSSTEGKKIVDILVQQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRCAEYYKQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGEHGIERTNEVALKVWSEVFFYLAENNVLFEGILLKPSMVTPGAECKERASPETVAQYTLNLLRRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGRPENVDAAQKILLVRAKANSLAQLXXXXXXXXXXXXXXXMFVKGYT
C0PS67_________________GLENTEANRQAYRQLLVSAPGLGQYISGSILFEETLYQSTTDGKKMVDVLVQQDIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRCAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGEHGLERTFEVALKVWAEVFFYLAENNVLFEGILLKPSMVTPGAECKDRASPETVAQYTLNLLRRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWAGRPENVDAAQKILLVRAKANSLAQLGKYSAEGESAESKEGMFVKGYT

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
844		33		66	0.997452
1053	80		20		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain