SustainPineDB

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene4383

Length: 840 nt

UniGene Fasta

Ace file of the UniGene biog2_v2.0_unigene4383

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene15684	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	Carotenoid 9,10(9',10')-cleavage dioxygenase n=1 Tax=Crocus sativus RepID=CCD_CROSA	-	-	73%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	73%
Blast2go	carotenoid cleavage dioxygenase 1	-	-	84%

Source	InterPros	Term	Type	e value	Identity
Sma3	Carotenoid oxygenase	IPR004294	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LMX1

Fln msg: Overlapping hits, possible frame ERROR between 251 and 239, and overlapping frame ERROR between 307 and 277, Distance to subject end: 290 aas, your sequence is shorter than subject: 250 - 540

Fln protein: MGTVAEDGNNGYKAVNPHPKKGVVSWLVDMVEKLVVETSALYGSKKPLxxxxxxFAPVSExxxxxxxxxxxxxPSCLDGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRYVKTSRLKQEEYFGKAKFFKIGDLKGMFGLFTVQIQLLREKFGVLDMSYGNGTANTALYIIMGRLLALQEADKPYALRVLEDGDLQTLGLMDYDNKLAHSFTAHPKVDPVTGEMFTFGYQHKPPYLTYRV

Protein Length: 251

Fln nts: ATGGGGATTCACAGAGGGAGATTGATCAAACACAAATACCGTTGGTCAAACACAAATACCGTAAAATCGCAGCGAAGATCCAAAATCCCACC_-_ATGGGGACTGTGGCGGAAGATGGCAACAACGGTTACAAGGCCGTAAATCCCCATCCCAAAAAGGGCGTCGTCTCGTGGCTGGTGGACATGGTGGAGAAACTAGTGGTTGAAACTTCTGCGTTGTATGGTTCGAAGAAGCCTCTGxxxxxxxxxxxxxxxxxxTTCGCTCCAGTCTCGGAAACxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTCCTAGTTGCTTGGATGGAGAGTTCGTGCGCGTTGGTCCCAATCCGAAATTCGCACCGGTAGCTGGCTATCACTGGTTTGATGGAGATGGAATGATCCATGGTCTCAGAATTAAAGATGGTAAAGCCACATATGTGTCACGTTATGTGAAGACATCACGCTTGAAACAAGAGGAATACTTTGGGAAAGCAAAATTCTTTAAGATTGGTGACCTCAAAGGAATGTTTGGACTATTCACTGTCCAAATACAACTTTTACGTGAGAAATTTGGTGTCCTAGACATGTCATATGGGAACGGAACAGCTAACACAGCCTTATATATCATCATGGGAAGGCTTCTTGCACTTCAAGAGGCAGATAAACCTTATGCGCTTAGAGTCCTCGAGGATGGTGATTTGCAAACTCTTGGGCTAATGGATTACGATAATAAATTAGCACACTCCTTCACTGCACATCCAAAGGTTGACCCTGTTACAGGGGAGATGTTTACATTTGGTTATCAACACAAGCCTCCCTATTTAACTTACCGGGTT

Fln Alignment:

Contig4383___MGTVAEDGNNGYKAVNPHPKKGVVSWLVDMVEKLVVETSALYGSKKPLHxxxxNFAPVSETAxxxxxxxxxxLPSCLDGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRYVKTSRLKQEEYFGKAKFFKIGDLKGMFGLFTVQIQLLREKFGVLDMSYGNGTANTALYIIMGRLLALQEADKPYALRVLEDGDLQTLGLMDYDNKLAHSFTAHPKVDPVTGEMFTFGYQHKPPYLTYRV
B8LMX1_________________MGTMAEDDSKGYKAVNPHPKGGLVSWVVDMVEKLVVEASTLYGSRKPMQxxxxNFAPVSETAxxxxxxxxxxLPSCLDGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRYVKTSRLKQEEYFGKAKFMKIGDLKGMFGLFIVQIHILREKLGVLDMSYGNGTANTALIYHHGKLLALQEADKPYVLRVLEDGDLQTLGLMDYDDKLAHSFTAHPKVDPITGEMFTFGYQHTPPYVTYRV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain