SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene4288

Length: 666 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene4288 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene7787	5/6

Source	Descriptions	Term	Type	Identity
AutoFact	RabGAP/TBC domain-containing protein [Arabidopsis thaliana] gb\|AAK43888.1\|AF370511_1 Unknown protein [Arabidopsis thaliana] gb\|AAC02742.2\| expressed protein [Arabidopsis thaliana] gb\|AAM91215.1\| unknown protein [Arabidopsis thaliana] gb\|AEC08431.1\| RabGAP	-	-	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	26%
Blast2go	tbc1 domain family member 22a	-	-	79%

Source	GOs	Term	Type	Identity
Blast2go	positive regulation of Rab GTPase activity	GO:0032851	Biological Process	79%
Blast2go	Rab GTPase activator activity	GO:0005097	Molecular Function	79%
Blast2go	intracellular	GO:0005622	Cellular Component	79%

Source	InterPros	Term	Type	e value	Identity
Sma3	Rab-GTPase-TBC domain	IPR000195	-	0.0	-

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain