SustainPineDB

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene4145

Length: 1148 nt

UniGene Fasta

Ace file of the UniGene biog2_v2.0_unigene4145

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene4021	9/9

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	74%
Blast2go	uncharacterized protein	-	-	87%

Source	GOs	Term	Type	Identity
Blast2go	protein folding	GO:0006457	Biological Process	87%
Blast2go	chromoplast organization	GO:0009661	Biological Process	87%
Blast2go	carotene biosynthetic process	GO:0016120	Biological Process	87%
Blast2go	heat shock protein binding	GO:0031072	Molecular Function	87%
Blast2go	unfolded protein binding	GO:0051082	Molecular Function	87%
Blast2go	plastid	GO:0009536	Cellular Component	87%
Blast2go	mitochondrion	GO:0005739	Cellular Component	87%

Source	InterPros	Term	Type	e value	Identity
Sma3	Fungal mating-type pheromone	IPR012597	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NXS0

Fln msg: Unexpected stop codon in the beginning of your sequence, your sequence is shorter than subject: 314 - 349

Fln protein: WGHLCQKPELFFFFYVLRKTQTLYFDTQMAAGKYANSL*KRMGGAVQVINRGRR*QN*CKEPTEAPASILIIEGPETVRDFAKMQLQEIQDNIRSRRNKIFLHMEEIRRLRIQQRIKNAELGISNNEVEIEMPDFPSFIPFLPPLTSENLKQYYATCFLLITGIIIFGGLLAPTLELKLGLGGTSYKDFILNMHLPLQLSQVDPIVASFSGGAVGVISALMVVEINNVKQQEQKRCRYCLGTGYLACARCSSTGSLVLVEPVATVNGSDQPLLPPTTERCPNCLGAGKVMCPTCLCTGMAMASEHDPRIDPFD*

Protein Length: 315

Fln nts: ATGGGGTCATCTTTGCCAGAAGCCTGAATTGTTCTTCTTCTTTTATGTTCTTCGGAAGACGCAGACGCTTTATTTTGACACACAAATGGCAGCGGGGAAATATGCAAATTCATTGTAAAAGAGAATGGGGGGTGCAGTGCAGGTTATCAACAGAGGGAGAAGATGACAAAACTGATGCAAAGAGCCAACCGAAGCGCCTGCCTCAATTTTGATTATAGAGGGACCTGAAACAGTACGAGACTTTGCAAAAATGCAATTGCAAGAGATTCAAGATAATATTAGAAGTCGCCGTAACAAAATTTTCCTTCATATGGAAGAGATCAGAAGGCTAAGGATACAACAAAGAATAAAGAATGCTGAACTGGGCATTAGTAATAATGAGGTCGAAATTGAGATGCCTGATTTTCCATCGTTCATTCCCTTCCTTCCTCCTCTGACATCGGAAAATTTGAAGCAGTATTATGCTACATGCTTTTTGCTTATCACCGGGATCATCATATTTGGTGGCCTCCTTGCTCCTACTCTTGAGCTTAAGTTGGGATTGGGTGGTACCTCCTACAAAGATTTTATACTCAACATGCATTTACCGTTGCAGCTAAGTCAGGTTGATCCTATAGTGGCATCCTTCTCGGGGGGAGCAGTAGGTGTTATATCAGCTCTGATGGTGGTTGAGATCAACAATGTAAAGCAGCAAGAACAAAAACGATGCAGATATTGCCTTGGAACTGGATATTTGGCCTGTGCCCGTTGTTCCAGCACAGGCTCGCTTGTGCTTGTTGAACCAGTAGCAACTGTCAATGGTTCGGACCAGCCATTATTGCCCCCTACAACTGAAAGATGCCCTAATTGTTTAGGGGCAGGAAAGGTCATGTGCCCAACATGCCTGTGTACTGGAATGGCAATGGCAAGTGAACATGACCCTCGTATAGATCCTTTTGATTAG___AGTTGGTTGACATTTCCCCATCATTATCGAGTCCAGTGTTGAGAGATTCGTGCATAAGCAGTCTTCAGATCTAGCACTAGAACGTTCAAGTTTCAGCTATGTTTATGGGTAAAAAGTTTAGTGAATTCTATAGTGCTCCAATTATTTATCATTAGTATGTGATAAAATAAATCTGATGAAATTCAAGAGAATGATGGTACATAAA

Fln Alignment:

Contig4145___KEPTE----APASILIIEGPETVRDFAKMQLQEIQDNIRSRRNKIFLHMEEXXXXXXXXXXKNAELGISNNEVEIEMPDFPSFIPFLPPLTSENLKQYYATCXXXXXXXXXXXXXXAPTLELKLGLGGTSYKDFILNMHLPLQLSQVDPIVASFSGGAVGVISALMVVEINNVKQQEQKRCRYCLGTGYLACARCSSTGSLVLVEPVATVNGSDQPLLPPTTERCPNCLGAGK
A9NXS0_________________KNPNEQDELGTSSFCIIEGPEMIQDFAKMQLQEIQDNVRSRRNKIFLLMEEVRRLRVQQRIKSADMRNVNDEDENEMPDIQSSIPFLPRLTTATLKQFYGICFLFIAGIIIFGGLLAPTLELKLGLGGTTYEDFIRNMHLPLQLSQVDPIVASFSGGAVGVISALMVVEVNNVEQQEGKRCKYCHGTGYLACARCFNTGAIVVVDPIARVDGSDSPLQLPATERCPNCLGAGK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain