SustainPineDB

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene4059

Length: 1349 nt

UniGene Fasta

Ace file of the UniGene biog2_v2.0_unigene4059

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene10978	13/13

Source	Descriptions	Term	Type	Identity
AutoFact	exocyst subunit exo70 family protein A1 [Arabidopsis thaliana] emb\|CAB83315.1\| putative protein [Arabidopsis thaliana] gb\|AAL59977.1\| unknown protein [Arabidopsis thaliana] gb\|AAM91685.1\| unknown protein [Arabidopsis thaliana] gb\|AED90620.1\| exocyst subun	-	-	67%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	100%
Blast2go	protein	-	-	84%

Source	GOs	Term	Type	Identity
Blast2go	lateral root morphogenesis	GO:0010102	Biological Process	84%
Blast2go	mucilage biosynthetic process involved in seed coat development	GO:0048354	Biological Process	84%
Blast2go	vesicle docking involved in exocytosis	GO:0006904	Biological Process	84%
Blast2go	cytosol	GO:0005829	Cellular Component	84%
Blast2go	exocyst	GO:0000145	Cellular Component	84%
Blast2go	extracellular vesicular exosome	GO:0070062	Cellular Component	84%
Blast2go	nucleus	GO:0005634	Cellular Component	84%
Blast2go	plasma membrane	GO:0005886	Cellular Component	84%

Source	InterPros	Term	Type	Identity
Sma3	Reverse transcriptase	IPR000477	-	-
Sma3	Exo70 exocyst complex subunit	IPR004140	-	-
Sma3		IPR015706	-	-
Sma3	Glycoside hydrolase, family 11, active site	IPR018208	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NWM1

Fln msg: Separated hits, possible frame ERROR between 273 and 276, your sequence is shorter than subject: 394 - 647

Fln protein: EKLTKDDVQKMQWEVLEGKIGNWIHFMRIAVKLLFAGERKVCDQIFEDLDPLGNQCFAEVTMSSVIMLLSFGEAIAKSKRSPEKLFVLLDxxETMRELLPEIEVIFGGKASAEMREAALNLTKRLAQIAQDTFGDFEEAVEKDATKTSILDGTVHPLTSYVINYVKFLFDYQSTLKQLFQENGNGGSSNSQLAVATKRIMSALQTNLDGKSRQYKDPALTHLFIMNNIHYMVRSVRRSEAKDLLGDEWVQIHRRIVQQHANHYRRNAWGKILQCLTVQGLSSSGSGGLGTEGSTSSSVSRALLKERFKAFNMQFEELHQRQTQWTVPDNELRESLRLAVAEVLLPAYRQFLKRFGSLLDNGKNPQKYIKYTPEDLDRMLSEFFEGKPRGDPRR*

Protein Length: 395

Fln nts: GAAAAGCTGACCAAAGATGATGTGCAAAAGATGCAATGGGAAGTGCTAGAGGGGAAGATTGGTAATTGGATCCACTTTATGCGCATAGCTGTTAAGCTCTTATTTGCAGGGGAGCGGAAAGTGTGTGATCAAATTTTTGAAGATTTAGATCCTCTTGGAAATCAGTGCTTTGCTGAAGTAACAATGAGTAGTGTGATCATGTTGCTGAGTTTTGGAGAAGCAATTGCCAAAAGCAAGAGGTCACCAGAAAAGTTATTTGTACTTCTTGACATxxxTGAAACAATGCGTGAGCTTCTACCAGAGATAGAAGTAATATTTGGAGGCAAAGCTTCTGCTGAAATGCGTGAAGCAGCTTTAAATCTCACAAAGAGACTGGCACAGATTGCTCAAGATACTTTTGGTGATTTTGAAGAAGCTGTTGAGAAAGATGCTACTAAGACTTCCATACTGGATGGAACAGTCCATCCTCTGACCAGTTACGTTATTAACTATGTGAAGTTCTTATTCGATTACCAATCAACATTGAAGCAACTTTTTCAAGAAAATGGGAATGGGGGTTCTTCAAATTCTCAGTTGGCGGTTGCAACAAAGCGAATAATGTCTGCGCTTCAAACCAATCTGGATGGGAAATCGAGGCAGTATAAAGATCCTGCACTGACACATCTCTTTATTATGAACAACATTCACTACATGGTTAGATCTGTACGCAGGTCAGAAGCAAAAGATTTACTGGGGGATGAATGGGTACAAATTCATCGTCGAATAGTACAGCAGCATGCAAATCATTACAGAAGAAATGCTTGGGGCAAGATTTTGCAATGCCTTACTGTGCAAGGCTTGAGTTCCTCTGGTAGTGGTGGACTTGGTACAGAAGGAAGCACCAGCAGTAGTGTTTCCAGAGCTCTTTTGAAGGAAAGGTTCAAAGCGTTTAATATGCAATTTGAAGAGCTTCACCAACGGCAAACTCAATGGACTGTTCCCGACAATGAGCTGCGTGAGTCTCTACGTTTGGCAGTGGCTGAGGTTCTCTTACCAGCTTATCGTCAATTTCTTAAACGCTTTGGATCTTTGTTAGACAACGGAAAAAATCCCCAGAAGTACATAAAATATACTCCCGAAGATTTGGATAGGATGCTAAGTGAATTCTTTGAAGGAAAACCAAGGGGAGATCCAAGACGGTAGGTGGAATTCTTGAATTTTTGTATATTTACATGACATTTCTATGTAAATTATGTGGTGTAATTTGAACACCCCTTGTAATATTTTTCCATGTTCAAAATGCAAGGTGGTAACTCTAGCTGAATCTCTAACCAATATTCATACATTAATTAAGAGCCGACTTAGTTGCAT

Fln Alignment:

Contig4059___EKLTKDDVQKMQWEVLEGKIGNWIHFMRIAVKLLFAGERKVCDQIFEDLDPLGNQCFAEVTMSSVIMLLSFGEAIAKSKRSPEKLFVLLDMxETMRELLPEIEVIFGGKASAEMREAALNLTKRLAQIAQDTFGDFEEAVEKDATKTSILDGTVHPLTSYVINYVKFLFDYQSTLKQLFQENGNGGSSNSQLAVATKRIMSALQTNLDGKSRQYKDPALTHLFIMNNIHYMVRSVRRSEAKDLLGDEWVQIHRRIVQQHANHYRRNAWGKILQCLTVQXXXXXXXXXXXXXXXXXXXXXRALLKERFKAFNMQFEELHQRQTQWTVPDNELRESLRLAVAEVLLPAYRQFLKRFGSLLDNGKNPQKYIKYTPEDLDRMLSEFFEGKPRGDPRR
A9NWM1_________________EKLTKDDVQKMQWEVLEGKIGNWIHFMRIAVKLLFAGERKVCDQIFEDLDPLGNQCFAEVTMSSVIMLLSFGEAIAKSKRSPEKLFVLLDMxETMRELLPEIEVIFGGKASAEMREAALSLTKRLAQTAQDTFGDFEEAVEKDATKTSILDGTVHPLTSYVINYVKFLFDYQSTLKQLFQENGNGGPSNSQLAAATMRIMSALQTNLDGKSKQYKDPALTQLFLMNNIHYMVRSVRRSEAKDLLGDDWVQRHRRIVQQHANHYRRNAWGKILQCLTVQGLSSSGSGGLGTDGSTSSSVSRALLKERFKAFNMQFEELHQRQTQWTVPDNELRESLRLAVAEVLLPAYRQFLKRFGSLLDNGKNPQKYIKYTAEDLDRMLGEFFEGKPRGDPRR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain