SustainPineDB

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene3740

Length: 1469 nt

UniGene Fasta

Ace file of the UniGene biog2_v2.0_unigene3740

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene17674	60/60

Source	Descriptions	Term	Type	Identity
AutoFact	Root cap; Antihaemostatic protein n=1 Tax=Medicago truncatula RepID=A2Q250_MEDTR	-	-	47%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	95%
Blast2go	structural constituent of cell	-	-	64%

Source	InterPros	Term	Type	Identity
Sma3	Legume lectin domain	IPR001220	-	-
Sma3	Multi antimicrobial extrusion protein	IPR002528	-	-
Sma3	Root cap	IPR009646	-	-
Sma3	Phospholipase A2, active site	IPR013090	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: D5AAU8

Fln msg:

Fln protein: MAMKKYKYQLLLVFISVTLVLQAAVVVGSKPPKDKHCKADKPGDDGYLSHCAGTIKCPESCPDCHLSCKFCGMAHCPKCDKVGSVCQDPRFIGGDGQIFYFHGYKDSDFCLVSDKGLHINAHFIGKRTANRTRDFTWVQALGILFDTHKFYVGSKRVGKWDSSVDQFVLYFDGYSISLPSGEGSKWVSPNREISIVRVENANYLNVEITGLLNSSIGIVPVTKEDSRVHKYEITDADCFAHLELNFDFFKLTDSVSGVLGQSYAPSFVNPVKKGVPMPLMGGEKKFMASSIFTPDCEAAQFKAIHHSSIVDTGLGRNSKRLGMPSAVCSSNGGKGSGFVCKR*

Protein Length: 344

Fln nts: ATGGGGGTAGCTCGTTTGGATGGTAAATCCACTGCAAAGAAAGAGATAAGGAATCCATGGATTCTTTGGTGGAATGAGAATACATGTATGCTGGTAAATTTTCATGACACTACACATCTGTCAGATGTTCAGTCTCCTGTTCTAACAGCAGGATCATAGGGATTTTCCATCATGTTGCAGTGATTTGTCTCCTGGCTTTGTGATATACTCAAACTAGAGATCATTAGAATTAGCGGGTAGGCTACTGGAGTCGCAATC_-_ATGGCAATGAAGAAGTATAAGTATCAGCTTTTGTTGGTCTTCATATCAGTTACCCTGGTTCTGCAGGCTGCTGTGGTTGTGGGATCGAAGCCTCCCAAGGACAAGCATTGCAAGGCAGATAAGCCAGGTGATGATGGGTACCTTTCACATTGTGCAGGGACCATCAAGTGCCCAGAATCATGCCCAGATTGCCATCTTTCATGCAAGTTCTGTGGAATGGCTCACTGTCCTAAATGTGACAAAGTGGGATCAGTGTGCCAGGATCCACGCTTCATAGGAGGCGATGGCCAGATTTTCTACTTTCATGGCTACAAGGACTCTGATTTCTGTCTTGTTTCAGACAAAGGCCTTCACATAAATGCCCATTTTATTGGCAAGAGGACTGCAAACAGGACCAGAGACTTTACATGGGTCCAGGCTCTCGGAATCCTGTTTGACACACACAAATTCTATGTGGGATCAAAAAGGGTTGGCAAGTGGGACTCTTCTGTGGACCAATTCGTCCTCTACTTTGATGGGTATTCTATTTCTCTGCCCTCAGGCGAAGGCTCCAAATGGGTTTCACCGAACAGAGAAATTAGCATTGTTAGAGTTGAGAATGCAAACTATCTCAATGTAGAAATCACAGGCCTTCTCAACTCATCCATAGGAATTGTGCCTGTAACCAAGGAAGACTCCAGAGTTCACAAGTATGAAATCACAGATGCAGACTGCTTTGCCCACCTTGAGCTCAATTTTGATTTTTTCAAGCTCACAGACTCGGTTTCAGGTGTTCTAGGCCAGTCCTATGCTCCCAGTTTTGTAAATCCAGTGAAGAAGGGTGTGCCGATGCCTCTGATGGGTGGAGAGAAGAAATTCATGGCTTCTTCAATCTTTACTCCTGATTGTGAAGCTGCTCAGTTTAAAGCTATCCATCACTCTTCCATTGTAGACACTGGGCTTGGAAGGAACTCAAAGAGACTGGGAATGCCTTCAGCAGTTTGTAGTTCCAATGGGGGCAAAGGATCTGGCTTTGTTTGCAAGAGGTAA___AATGGGCATGACAGAACAGCTGTTGTTTCCATCTGTAAGGTCTCTCTGAGGCATTCAGATGTGAACTTGGAATTAGTATCTAGTTGCTTCTGTGAACTTGTAATAAGTGTCTAGTAGCTGTGTGGACTCCCTCCTGTATTCATATCCATCAATGTAATAAGACAAAGACATTTTAGAGCTAC

Fln Alignment:

Contig3740___MAMKKYKYQLLLVFISVTLVLQAAVVVGSKPPKDKHCKADKPGDDGYLSHCAGTIKCPESCPDCHLSCKFCGMAHCPKCDKVGSVCQDPRFIGGDGQIFYFHGYKDSDFCLVSDKGLHINAHFIGKRTANRTRDFTWVQALGILFDTHKFYVGSKRVGKWDSSVDQFVLYFDGYSISLPSGEGSKWVSPNREISIVRVENANYLNVEITGLLNSSIGIVPVTKEDSRVHKYEITDADCFAHLELNFDFFKLTDSVSGVLGQSYAPSFVNPVKKGVPMPLMGGEKKFMASSIFTPDCEAAQFKAIHHSSIVDTGLGRNSKRLGMPSAVCSSNGGKGSGFVCKR
D5AAU8_________________MAMKKYKYQLLLVFISVTLVLQAAVVVGSKPPKDKHCKADKPGDDGYLSHCTGTIKCPESCPECHLSCKFCGMAHCPKCDRVGSVCQDPRFIGGDGQMFYFHGYKDSDFCLVTDKGLHINAHFIGKRTANRTRDFTWVQALGILFDTHKFYVGSKRVGKWHSSVDQFVLYFDGYSISLPPGEGSKWVSPNRELSIVRVENANYLNVEITGLLNSSIGIVPVTKEDSRVHKYEITDADCFAHLELNFDFFKLTDSVSGVLGQSYAPSFVNPVKKGVPMPLMGGEKNFMASSIFTPDCEAVQFKAMHHSSIVGSGLGRNPHRLGMPSAVCSSNGSEGSGFVCKR

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
1336	12	87			0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain