SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene3373

Length: 666 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene3373 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene25751	6/6

Source	Descriptions	Term	Type	Identity
AutoFact	ankyrin repeats-containing protein [Arabidopsis thaliana] sp\|Q9C7A2.1\|Y3236_ARATH RecName: Full=Ankyrin repeat-containing protein At3g12360 gb\|AAG51002.1\|AC069474_1 ankyrin-like protein; 93648-91299 [Arabidopsis thaliana] gb\|AEE75188.1\| ankyrin repeats-co	-	-	53%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	92%
Blast2go	ankyrin repeat-containing	-	-	78%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to salt stress	GO:0009651	Biological Process	0.0	78%
Blast2go	plasma membrane	GO:0005886	Cellular Component	0.0	78%

Source	InterPros	Term	Type	e value	Identity
Sma3	Ankyrin repeat	IPR002110	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 4)

Position	A %	C %	G %	T %	Probability
364		33		66	0.997452
365		33	66		0.997452
366		33	66		0.997452
367	33	66			0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain