SustainPineDB

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene2844

Length: 1052 nt

UniGene Fasta

Ace file of the UniGene biog2_v2.0_unigene2844

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene24989	1/18
SustainPine v2.0	sp_v2.0_unigene60258	17/18

Source	Descriptions	Term	Type	Identity
AutoFact	3.1.2 inositol monophosphatase n=3 Tax=Phaseoleae RepID=C1LZ50_PHAVU	-	-	73%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	l-galactose-1-phosphate phosphatase	-	-	84%

Source	ECs	Term	Type	e value	Identity
Blast2go	Inositol-phosphate phosphatase.	EC:3.1.3.25	-	0.0	84%

Source	KEGGs	Term	Identity
Blast2go	Inositol phosphate metabolism	00562	84%
Blast2go	Metabolic pathways	01100	84%
Blast2go	Biosynthesis of secondary metabolites	01110	84%
Blast2go	Phosphatidylinositol signaling system	04070	84%

Source	GOs	Term	Type	Identity
Blast2go	response to cold	GO:0009409	Biological Process	84%
Blast2go	L-ascorbic acid biosynthetic process	GO:0019853	Biological Process	84%
Blast2go	inositol biosynthetic process	GO:0006021	Biological Process	84%
Blast2go	L-galactose-1-phosphate phosphatase activity	GO:0010347	Molecular Function	84%
Blast2go	inositol monophosphate 1-phosphatase activity	GO:0008934	Molecular Function	84%
Blast2go	plasma membrane	GO:0005886	Cellular Component	84%
Blast2go	response to karrikin	GO:0080167	Biological Process	84%

Source	InterPros	Term	Type	e value	Identity
Sma3	Inositol monophosphatase	IPR000760	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NKB3

Fln msg:

Fln protein: MGDCDELSEFLSSAVEVAKRAGEMIGTNFYKEKSVEHKGKVDLVTETDKACEELAFQFLKEKYPEHKFIGEETSAVHGTDDLTDAPTWIIDPVDGTTNFVHRFPFVCISIGLTIGKVPTVGVVYNPIVGELFTAIRGRGAFLNGNPISASSQTELGNALLAAEIGTKRDKETVDITTNRINRLLFKVRSLRMSGSCALNLCGVACGRLDITYELGFGGPWDVAAGVVIIQEAGGCVFDPSGDEVDIMSRRIAASNGFLKEEFVDELKSLCV*

Protein Length: 273

Fln nts: ATGGGGACTCTACCAAAAGGATTGAGCAGATCTCTTCTCTGAACCTTCAAAAGAACCCTCCTCCAACTCCTTTTACTTTGTCTGTTTAACGATTGAAA_-_ATGGGGGACTGCGACGAGCTGAGTGAATTTCTTTCTTCTGCTGTGGAGGTCGCAAAAAGAGCTGGGGAGATGATTGGGACAAATTTTTACAAAGAGAAATCCGTGGAACACAAAGGAAAGGTAGATTTAGTAACAGAGACTGATAAGGCCTGTGAGGAGCTTGCGTTCCAGTTCCTGAAGGAAAAATACCCAGAACATAAGTTCATTGGCGAAGAAACTTCTGCAGTTCATGGAACTGACGATTTAACTGATGCACCCACCTGGATAATCGACCCTGTGGATGGAACCACGAATTTTGTTCACAGGTTTCCTTTTGTCTGCATTTCAATTGGGCTTACGATTGGAAAGGTTCCAACTGTGGGTGTTGTTTACAATCCAATAGTTGGTGAGTTGTTTACAGCTATCCGTGGAAGGGGTGCTTTTCTTAATGGGAACCCTATAAGTGCATCTTCTCAGACTGAGTTGGGGAATGCGCTTCTTGCAGCTGAGATTGGTACAAAGCGGGATAAAGAAACTGTTGACATCACTACAAATAGGATTAACAGGCTACTTTTCAAGGTACGGTCATTACGTATGTCTGGCTCTTGTGCTCTTAACCTCTGTGGAGTAGCATGTGGGAGGCTTGATATTACCTACGAGCTTGGATTTGGAGGTCCCTGGGATGTCGCTGCTGGGGTTGTAATAATTCAGGAGGCTGGTGGCTGCGTCTTTGATCCGTCAGGAGATGAGGTCGACATTATGTCACGGCGGATTGCAGCATCTAATGGATTTCTGAAAGAGGAATTTGTGGATGAGCTAAAATCATTATGTGTATGA___CATAATATTTTGTTGGAGAATTTTGCGGCACCTTTGTTGCTGAAGTAATCATTGTTATGCATCGAACAGATTTTATCGAACTATTTTCTAAAGCTCGTTTCCAATTATTTAGCAAAACCTCTTATCTTAGAAACCCCT

Fln Alignment:

Contig2844___MGDCDELSEFLSSAVEVAKRAGEMIGTNFYKEKSVEHKGKVDLVTETDKACEELAFQFLKEKYPEHKFIGEETSAVHGTDDLTDAPTWIIDPVDGTTNFVHRFPFVCISIGLTIGKVPTVGVVYNPIVGELFTAIRGRGAFLNGNPISASSQTELGNALLAAEIGTKRDKETVDITTNRINRLLFKVRSLRMSGSCALNLCGVACGRLDITYELGFGGPWDVAAGVVIIQEAGGCVFDPSGDEVDIMSRRIAASNGFLKEEFVDELKSLCV
A9NKB3_________________MGDCDELSGFLSSAVEVAKRAGEMIATNFYKEKSVEHKGKVDLVTETDKACEELAFQFLKQKYPEHKFIGEETSAVHGTDDLTDAPTWIIDPVDGTTNFVHRFPFVCISIGLTIGKVPTVGVVYNPIIGELFTAIRGRGAFLNGSPISSSSQTELGSALLAAEIGTKRDKETVDITTNRINGLLFKVRSLRMSGSCALNLCGVACGRLDITYELGFGGPWDVAAGVVIIQEAGGCVFDPSGDEVNIMSQRIAASNGYLKEEFLDELKASCV

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
139		66		33	0.997452
428			20	80	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain