SustainPineDB

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene2557

Length: 1095 nt

UniGene Fasta

Ace file of the UniGene biog2_v2.0_unigene2557

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene3312	12/12

Source	Descriptions	Term	Type	Identity
AutoFact	S-adenosyl-L-methionine Mg-protoporphyrin IX methyltranserase [Nicotiana tabacum]	-	-	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	90%
Blast2go	magnesium-protoporphyrin ix methyltransferase	-	-	80%

Source	ECs	Term	Type	e value	Identity
Blast2go	Magnesium protoporphyrin IX methyltransferase.	EC:2.1.1.11	-	0.0	80%

Source	KEGGs	Term	Identity
Blast2go	Porphyrin and chlorophyll metabolism	00860	80%
Blast2go	Metabolic pathways	01100	80%
Blast2go	Biosynthesis of secondary metabolites	01110	80%

Source	GOs	Term	Type	Identity
Blast2go	chlorophyll biosynthetic process	GO:0015995	Biological Process	80%
Blast2go	protein methylation	GO:0006479	Biological Process	80%
Blast2go	photosynthesis	GO:0015979	Biological Process	80%
Blast2go	magnesium protoporphyrin IX methyltransferase activity	GO:0046406	Molecular Function	80%
Blast2go	protein methyltransferase activity	GO:0008276	Molecular Function	80%
Blast2go	chloroplast envelope	GO:0009941	Cellular Component	80%
Blast2go	chloroplast thylakoid membrane	GO:0009535	Cellular Component	80%

Source	InterPros	Term	Type	Identity
Sma3	Magnesium protoporphyrin O-methyltransferase	IPR010251	-	-
Sma3	Methyltransferase type 11	IPR013216	-	-
Sma3	Magnesium-protoporphyrin IX methyltransferase, C-terminal	IPR010940	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NUI2

Fln msg:

Fln protein: MAMANTVTTSPLFSPFSHNPSIGKPFNAGRPQNHLAISKRLIPTAIHSSEHVLKLAEIVPSINYDPRAIQMAAPLVGGATVAAVVALLSFADPETTRKADDKEEVRSYFNTTGFDRWNRIYGQTDDLNSVQMDIRVGHAQTVEKILEMVKNDGPLEGIKVCDAGCGTGSLSIPLAMEGAIVSASDISSAMVAEAERRAQESINEGSKLVKPRFETRDLESLDGKYDTVACVDVLIHYPQDKAAGMIQHLASLAERRLILSFAPKTWYYSILKRIGELFPGPSKTTRAYLHSEEDVEAALKAAGWVVRRRDMTATKFYFPGCWRQFRLGLNDRHCKQHV*

Protein Length: 340

Fln nts: ATGGGGATAGCAGAGTTCGCCACTGAAG_-_ATGGCAATGGCGAACACTGTAACAACAAGTCCCCTGTTCTCCCCATTCTCCCACAATCCCTCCATTGGCAAACCCTTCAATGCTGGCCGGCCCCAAAACCACTTAGCAATCAGCAAAAGACTGATCCCAACAGCGATTCACTCCAGTGAACATGTATTGAAACTGGCAGAGATTGTTCCGTCCATCAATTACGACCCCAGGGCTATTCAAATGGCGGCTCCGTTGGTGGGAGGCGCCACGGTCGCCGCTGTCGTAGCGTTGCTCTCGTTCGCAGACCCCGAGACCACGAGAAAGGCAGACGACAAAGAAGAGGTAAGAAGCTATTTCAATACCACTGGCTTTGATAGATGGAACAGAATTTATGGCCAAACGGATGATTTGAACTCAGTTCAGATGGATATCCGTGTCGGCCATGCACAGACTGTGGAAAAGATCTTGGAAATGGTGAAGAATGATGGGCCTCTGGAGGGCATTAAGGTATGTGATGCAGGCTGTGGGACTGGAAGCTTATCGATTCCCTTGGCAATGGAGGGAGCCATAGTTTCTGCTAGCGATATATCCTCTGCAATGGTGGCCGAAGCAGAAAGGAGAGCCCAGGAATCGATAAACGAGGGTTCGAAACTTGTGAAACCCAGGTTCGAAACCCGGGACTTGGAGTCACTGGATGGGAAATATGACACCGTGGCATGCGTGGATGTTTTGATTCATTACCCACAAGACAAAGCTGCAGGGATGATTCAGCATCTTGCCTCTCTGGCTGAAAGAAGGCTGATTTTGAGCTTTGCACCCAAGACCTGGTATTACAGTATTCTGAAGAGGATTGGTGAGCTTTTCCCCGGGCCTTCGAAGACTACCAGAGCTTATTTGCACTCGGAAGAGGATGTGGAGGCAGCTCTGAAAGCTGCAGGGTGGGTGGTACGGCGGCGAGACATGACCGCTACAAAATTCTACTTTCCAGGTTGCTGGAGGCAGTTCCGGCTGGGTCTCAATGACAGACATTGTAAACAGCATGTGTGA___ACCTGCTAAGCCAGGATAGAATGTTGGTTATTGATAAAGATGAAATTATG

Fln Alignment:

Contig2557___MANTVTTSPLFSPFSHNPSIGKPFNAGRPQNHLAISKRLIPTAIHSSEHVLKLAEIVPSINYDPRAIQMXXXXXXXXXXXXXXXXXSFADPETTRKADDKEEVRSYFNTTGFDRWNRIYGQTDDLNSVQMDIRVGHAQTVEKILEMVKNDGPLEGIKVCDAGCGTGSLSIPLAMEGAIVSASDISSAMVAEAERRAQESINEGSKLVKPRFETRDLESLDGKYDTVACVDVLIHYPQDKAAGMIQHLASLAERRLILSFAPKTWYYSILKRIGELFPGPSKTTRAYLHSEEDVEAALKAAGWVVRRRDMTATKFYF
A9NUI2_________________MANTVTAGPALSPFSHNPFIGKPLNSARAQNHLGITKKRTPSAILSSENVLKLAEIVPSINYDPRAIQMAVPWVGGATVAAVVAFLSLAEPETTRKADDKEEVRSYFNTTGFDRWNRIYGQTDDLNSVQLDIRLGHAQTVEKILEMVKNDGPLEGLKVCDAGCGTGSLSIPLAMEGAIVSASDISSAMVAEAERRAQESINEGSKLVRPRFETRDLESLDGKYHTVACVDVLIHYPQEKAAGMIQHLASLAERRLILSFAPKTWYYSVLKRIGELFPGPSKTTRAYLHSEEDVEAALKAAGWVVRRRDMTATKFYF

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
842		25		75	0.996473
844	75		25		0.996473
845	75	25			0.996473
851		25		75	0.996473
858		25	75		0.996473
860			33	66	0.997452
861		33		66	0.997452
863	33			66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain