SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene2246

Length: 1172 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene2246 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene18268	3/15
SustainPine v2.0	sp_v2.0_unigene21975	10/15
SustainPine v2.0	sp_v2.0_unigene27802	2/15

Source	Descriptions	Term	Type	e value	Identity
AutoFact	monothiol glutaredoxin-S15 [Arabidopsis thaliana] ref\|NP_001030704.1\| monothiol glutaredoxin-S15 [Arabidopsis thaliana] sp\|Q8LBK6.2\|GRS15_ARATH RecName: Full=Monothiol glutaredoxin-S15, mitochondrial; Short=AtGrxS15; Flags: Precursor dbj\|BAB02297.1\| unnam	-	-	5.60519e-45	54%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	92%
Blast2go	monothiol glutaredoxin-s15	-	-	0.0	77%

Source	GOs	Term	Type	e value	Identity
Blast2go	metal ion binding	GO:0046872	Molecular Function	0.0	77%
Blast2go	mitochondrion	GO:0005739	Cellular Component	0.0	77%

Source	InterPros	Term	Type	Identity
Sma3	Glutaredoxin	IPR002109	-	-
Sma3	Monothiol glutaredoxin-related	IPR004480	-	-
Sma3		IPR012335	-	-

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
148	66	33			1.0
155	66		33		1.0
337	44			55	1.0
378	14	85			0.993533
400			85	14	0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain