SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene2215

Length: 934 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene2215 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene7936	19/19

Source	Descriptions	Term	Type	e value	Identity
AutoFact	exportin 1A [Arabidopsis thaliana] emb\|CAB56597.1\| Exportin1 (XPO1) protein [Arabidopsis thaliana] emb\|CAB89280.1\| Exportin1 (XPO1) protein [Arabidopsis thaliana] emb\|CAC01715.1\| Exportin1 (XPO1) protein [Arabidopsis thaliana] gb\|AAL07205.1\| putative expo	-	-	0.0	82%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	83%

Source	InterPros	Term	Type	Identity
Sma3	Armadillo-like helical	IPR011989	-	-
Sma3	Exportin-1/Importin-beta-like	IPR013598	-	-
Sma3	CRM1 C-terminal domain	IPR014877	-	-
Sma3	Importin-beta, N-terminal	IPR001494	-	-

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	G %	T %	Probability
880	75	25			0.996473
881		25		75	0.996473
883			75	25	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain