SustainPineDB

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene1720

Length: 791 nt

UniGene Fasta

Ace file of the UniGene biog2_v2.0_unigene1720

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene3828	7/7

Source	Descriptions	Term	Type	Identity
AutoFact	Neutral alpha-glucosidase ab, putative n=1 Tax=Ricinus communis RepID=B9STU2_RICCO	-	-	67%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	28%
Blast2go	neutral alpha-glucosidase ab	-	-	79%

Source	ECs	Term	Type	e value	Identity
Blast2go		EC:3.2.1.2-	-	0.0	79%
Blast2go	Glucan 1,3-alpha-glucosidase.	EC:3.2.1.84	-	0.0	79%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	N-Glycan biosynthesis	00510		0.0	79%
Blast2go	Metabolic pathways	01100		0.0	79%

Source	GOs	Term	Type	Identity
Blast2go	cellulose biosynthetic process	GO:0030244	Biological Process	79%
Blast2go	defense response to bacterium	GO:0042742	Biological Process	79%
Blast2go	unidimensional cell growth	GO:0009826	Biological Process	79%
Blast2go	response to cadmium ion	GO:0046686	Biological Process	79%
Blast2go	maltose alpha-glucosidase activity	GO:0032450	Molecular Function	79%
Blast2go	glucan 1,3-alpha-glucosidase activity	GO:0033919	Molecular Function	79%
Blast2go	carbohydrate binding	GO:0030246	Molecular Function	79%
Blast2go	chloroplast	GO:0009507	Cellular Component	79%
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	79%

Source	InterPros	Term	Type	Identity
Sma3	Glycoside hydrolase, family 31	IPR000322	-	-
Sma3	Reverse transcriptase	IPR000477	-	-
Sma3		IPR015706	-	-
Sma3	Tryptophan/tyrosine permease	IPR018227	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LKI6

Fln msg: Distance to subject end: 319 aas, your sequence is shorter than subject: 263 - 908

Fln protein: AMPQLFATAYHQCRWNYRDEEDVSNVDAKFDEFDIPYDVLWLDIEHTDGKRYFTWDNLLFPNPEEMQNKLMAKGRHMVTIVDPHIKRDDGFPLHKEATQKGYYVKNAHGNDFDGWCWPGASSYLDMLNPEIRSWWADKFSLSSYKGSTPSLYIWNDMNEPSVFNGPELTMPRDALHFGDVEHREVHNAYGYFFHMGSADGLLKRGGGNDRPFVLSRAFFAGSQRVGPVWTGDNTADWDQLRVSVPMLLTLGLTGMAFSGADVG

Protein Length: 264

Fln nts: GCCATGCCACAGCTTTTTGCTACTGCTTATCACCAGTGTCGCTGGAATTACAGAGACGAAGAAGATGTATCCAATGTGGATGCCAAGTTTGATGAGTTTGATATACCGTATGATGTTCTCTGGCTTGACATTGAACACACTGATGGGAAGAGATACTTTACATGGGACAATTTGCTCTTTCCGAATCCAGAAGAGATGCAGAATAAGCTCATGGCAAAAGGCCGGCATATGGTGACCATTGTTGATCCTCATATTAAGAGGGATGATGGTTTTCCGCTGCACAAGGAAGCGACTCAAAAGGGGTATTATGTTAAGAATGCTCATGGTAACGACTTCGATGGCTGGTGTTGGCCAGGTGCATCGTCTTATTTGGATATGCTGAATCCAGAAATCAGGTCATGGTGGGCTGACAAATTTTCTCTTAGCAGCTATAAGGGTTCAACACCATCGTTGTACATATGGAATGATATGAATGAACCTTCTGTATTCAATGGTCCAGAGCTAACGATGCCCAGAGATGCTCTTCACTTTGGAGATGTTGAGCATCGCGAAGTTCATAATGCTTATGGATATTTCTTTCATATGGGCTCTGCTGATGGTCTCTTGAAACGAGGAGGTGGGAATGACAGGCCATTTGTTTTATCACGAGCATTTTTTGCTGGGAGCCAGAGGGTGGGCCCAGTTTGGACGGGAGACAATACAGCCGATTGGGACCAGCTGAGGGTTTCTGTTCCAATGCTGTTAACTCTTGGTCTCACTGGAATGGCTTTTTCTGGTGCCGATGTTGGGGG

Fln Alignment:

Contig1720___AMPQLFATAYHQCRWNYRDEEDVSNVDAKFDEFDIPYDVLWLDIEHTDGKRYFTWDNLLFPNPE--EMQNKLMAKGRHMVTIVDPHIKRDDGFPLHKEATQKGYYVKNAHGNDFDGWCWPGASSYLDMLNPEIRSWWADKFSLSSYKGSTPSLYIWNDMNEPSVFNGPELTMPRD------------------------------------------------ALHFGDVEHREVHNAYGYFFHMGSADGLLKRGGGNDRPFVLSRAFFAGSQRVGPVWTGDNTADWDQLRVSVPMLLTLGLTGMAFSGADV
B8LKI6_________________AMPY-WAFGFHQCRWGYQNVSDITNVVDNYNKSQIPLDVIWNDDDHMDAAKDFTLDPVNYPEHKLRPFLDRIHANGMRYVVLIDPGIAINTSYGTFQRGMADDVFIMH-DGAPFLGQVWPGAVYFPDFLNPKTVNFWADE--ISRFHSMVPVDGLWIDMNEVSNFCSGKCTVPTNRSCPGTGLPWECCLDCTNITATQWDVPPYKINASGAGAPLGFKTIATSSVHYNGILEYDAHSLYG--FSQAIATHKALQNLLNKRPFVLTRSTFVGSGSYAAHWTGDNKATWEDLRYSISTILNFGMFGMPMVGADI

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
505		16		83	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain