SustainPineDB

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene1607

Length: 1257 nt

UniGene Fasta

Ace file of the UniGene biog2_v2.0_unigene1607

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene27752	22/22

Source	Descriptions	Term	Type	Identity
AutoFact	Probable aquaporin n=4 Tax=Picea RepID=O65045_PICMA	-	-	84%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	92%
Blast2go	aquaporin	-	-	89%

Source	InterPros	Term	Type	e value	Identity
Sma3	Aquaporin	IPR012269	-	0.0	-
Sma3	Major intrinsic protein	IPR000425	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NK85

Fln msg: Overlapping hits, possible frame ERROR between 173 and 106,

Fln protein: MAxxxxxxxxxxxxxxxxxxxxxxxxPAALVDINEFKLWSFYRALIAEFIATLLFLYITIATVIGHSRTKADCGSVGVLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVLYMIAQCLGAICGAGLVKAFQKPYYDRYGGGANVVAHGYTKGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYGHKHSWDDQWIFWVGPMVGAAAAAGYHQHILRATAIKALGSFRSNPQV*

Protein Length: 287

Fln nts: TGATTAGAAGAGAAGAATCAGTGACAGTTCTGAATCAAGTCTTCAGTCGGCGAAGGGAAACTGAGAGAGGAGAGAGCGTTTTGTGGTTTGTCTTCTCT_-_ATGGCGxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCCAGCCGCTCTGGTGGACATTAATGAATTCAAGCTCTGGTCATTCTACCGTGCATTGATAGCAGAGTTCATTGCCACCTTGCTCTTTCTCTACATAACTATTGCCACAGTTATTGGGCACTCAAGGACCAAAGCAGATTGTGGAAGTGTGGGCGTTCTGGGTATTGCCTGGTCTTTTGGAGGGATGATCTTTGTTCTGGTTTACTGCACAGCTGGTATTTCAGGTGGACATATCAATCCTGCAGTGACATTTGGACTCTTCCTGGCTAGGAAGGTGTCACTGCCCAGAGCTGTTCTGTACATGATAGCACAGTGCTTGGGAGCCATCTGTGGAGCTGGACTTGTCAAGGCGTTCCAGAAGCCCTACTATGACAGATATGGAGGAGGGGCTAACGTTGTGGCTCATGGGTACACTAAGGGAGTTGGGCTGGCTGCGGAGATCATTGGCACATTTGTGTTGGTCTACACAGTTTTCTCTGCCACTGATCCCAAGCGCAGTGCCCGTGATTCTCATGTTCCTGTCTTGGCACCTCTGCCTATTGGGTTTGCTGTATTCATGGTACATTTGGCCACCATCCCTATAACTGGTACAGGCATCAATCCTGCGAGGAGTTTTGGAGCGGCTGTGATCTATGGCCACAAGCATTCCTGGGATGATCAATGGATATTCTGGGTAGGTCCTATGGTGGGCGCTGCTGCTGCAGCAGGTTATCATCAGCACATCCTCCGAGCAACTGCCATTAAGGCACTGGGATCCTTCCGTAGTAACCCACAAGTCTAG___CTTCATGTTAGGCACAATCGTGAAAATAGAGCCCCACGAAACTGAACTTTTAAGGCTTTCGTGGCTTAAAGAGTGCAAAAATTATCAGGAAGGGATTGTGGCAGCTTGCAGTGGAGCCTGAATTTATTTGTGGGGATCTGTTTCTGTATTTCTAGCACTCAGATGTTGGATATTGTGTATACAATTTAGGGTTGGTTTGTGACTGTTCATGATTTCTGTCATAAAGGCTAGAATCAGTGATTCATATTCATGTTCCATCAGTGAGTGTGCCATGTACTAGCAATTCTTTTAATATATTTGAAG

Fln Alignment:

Contig1607___MAxxxxxxxxxxxxxxxxxxxxxxxPAALVDINEFKLWSFYRALIAEFIATLLFLYITIATVIGHSRTKADCGSVGVLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVLYMIAQCLGAICGAGLVKAFQKPYYDRYGGGANVVAHGYTKGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYGHKHSWDDQWIFWVGPMVXXXXXXXYHQHILRATAIKALGSFRSNPQV
A9NK85_________________MAxxxxxxxxxxxxxxxxxxxxxxxPAPLVDINEFKLWSFYRALIAEFIATLLFLYITIATVIGHSRNKADCGSVGVLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVMYMIAQCLGAICGAGLVKAFQKPYYDRYGGGANVVAHGYTKGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYGHKHSWDDQWIFWVGPMVGAAAAAAYHQHILRATAIKALGSFRSNPQV

SNPs (tot: 6)

Position	A %	C %	G %	T %	Probability
629	25		75		0.996473
632			25	75	0.996473
633			25	75	0.996473
656	75		25		0.996473
666	80			20	0.995493
668		80	20		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain