SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene1564

Length: 760 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene1564 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene24810	4/4

Source	Descriptions	Term	Type	Identity
AutoFact	Aldehyde dehydrogenase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SP43_VITVI	-	-	60%
FL-Next	sp=Aldehyde dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	59%
Blast2go	aldehyde dehydrogenase family 3 member f1-like	-	-	73%

Source	GOs	Term	Type	Identity
Blast2go	protein binding	GO:0005515	Molecular Function	73%
Blast2go	membrane	GO:0016020	Cellular Component	73%
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	73%

Source	InterPros	Term	Type	Identity
Sma3	DNA methylase, N-6 adenine-specific, conserved site	IPR002052	-	-
Sma3	TonB box, conserved site	IPR010916	-	-
Sma3	Aldehyde dehydrogenase NAD(P)-dependent	IPR012394	-	-
Sma3	FG-GAP	IPR013517	-	-
Sma3	Aldehyde dehydrogenase domain	IPR015590	-	-
Sma3	Aldehyde dehydrogenase, conserved site	IPR016160	-	-
Sma3	Aldehyde dehydrogenase, N-terminal	IPR016162	-	-
Sma3	Aldehyde dehydrogenase, C-terminal	IPR016163	-	-

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain