SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene1447

Length: 774 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene1447 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene21673	12/12

Source	Descriptions	Term	Type	Identity
AutoFact	DCD (Development and Cell Death) domain protein [Arabidopsis thaliana] dbj\|BAB01090.1\| unnamed protein product [Arabidopsis thaliana] gb\|AAL24231.1\| AT3g27090/MOJ10_18 [Arabidopsis thaliana] gb\|AAM65351.1\| AT3g27090/MOJ10_18 [Arabidopsis thaliana] gb\|AEE7	-	-	85%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	88%
Blast2go	dcd (development and cell death) domain protein	-	-	94%

Source	InterPros	Term	Type	Identity
Sma3	Nucleotidyl transferase domain	IPR002934	-	-
Sma3		IPR013089	-	-
Sma3	Development/cell death domain	IPR013989	-	-

Full-Lengther Next Prediction

SNPs (tot: 6)

Position	A %	C %	G %	T %	Probability
371		14	85		0.993533
372		14	85		0.993533
373		14	85		0.993533
375	83			16	0.994512
390	20		80		0.995493
521	25		75		0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain