SustainPineDB

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene580

Length: 827 nt

UniGene Fasta

Ace file of the UniGene biog2_v2.0_unigene580

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene27644	10/10

Source	Descriptions	Term	Type	Identity
AutoFact	Beta-galactosidase n=1 Tax=Picea sitchensis RepID=A9NUR2_PICSI	-	-	91%
FL-Next	sp=Beta-galactosidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	82%
Blast2go	beta-galactosidase 8	-	-	79%

Source	GOs	Term	Type	e value	Identity
Blast2go	catalytic activity	GO:0003824	Molecular Function	0.0	79%
Blast2go	cell wall	GO:0005618	Cellular Component	0.0	79%

Source	InterPros	Term	Type	Identity
Sma3	Glycoside hydrolase, family 35	IPR001944	-	-
Sma3	Glycoside hydrolase, subgroup, catalytic domain	IPR013781	-	-
Sma3	D-galactoside/L-rhamnose binding SUEL lectin domain	IPR000922	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NUR2

Fln msg: Unexpected stop codon in the beginning of your sequence, your sequence is shorter than subject: 258 - 861

Fln protein: G*LVEQLEFYLGETTASVQWDCRVKPPYESNDDMVQDQH*CPSGNDPVALNLFGMGKGVAWVNGKSIGRYWPSYIASQSGCTDSCDYRGAYSSSKCLTNCGQPSQKLYHVPRSWIQSTGNVLVLFEELGGDPTQISFVARSVGTVCARVSETHLPPVGSWKSSATSGLKVNKPKAELQLHCPSSGHLIKSIKFASFGTPTGRCGSFTYGHCNTNSTMSIIEEACIGRESCSVEVSIEKFGDPCRGTVKNLAVEASCS*

Protein Length: 259

Fln nts: ATGGGTGACTGGTTGAACAGTTGGAATTTTATTTGGGTGAGACTACAGCTAGTGTGCAGTGGGATTGCAGGGTCAAACCTCCCTACGAATCAAACGATGATATGGTACAAGACCAACATTGATGCCCAAGTGGCAATGATCCAGTGGCTCTAAACCTTTTTGGCATGGGCAAGGGAGTAGCCTGGGTAAATGGAAAGAGTATTGGACGCTATTGGCCATCCTACATTGCTTCTCAGAGTGGTTGTACTGATTCATGTGACTATCGAGGAGCTTACTCTTCAAGTAAATGTCTAACAAATTGTGGCCAACCATCACAGAAGCTATATCATGTGCCTCGTTCTTGGATTCAGTCAACTGGTAATGTTTTGGTTCTCTTTGAAGAGCTGGGTGGAGATCCTACTCAAATCTCCTTCGTGGCACGTTCTGTAGGAACTGTGTGTGCCCGAGTATCAGAGACACATCTTCCACCTGTAGGGTCATGGAAATCAAGTGCAACTAGTGGATTGAAAGTCAATAAACCAAAGGCAGAACTTCAGTTACATTGTCCATCATCTGGTCATCTCATAAAATCTATCAAGTTTGCGAGTTTTGGAACTCCCACAGGGCGCTGTGGAAGCTTCACATATGGCCATTGCAACACCAACAGTACAATGTCCATCATAGAAGAGGCATGCATTGGACGTGAGAGTTGCTCAGTTGAGGTTTCAATAGAGAAATTTGGAGATCCTTGTAGAGGCACTGTTAAGAACCTGGCAGTGGAAGCTAGCTGCAGTTGA___TATAGAATAGTACCTTTTTTAGATTCTAGATGATGAAATAAAGTGAAGAAT

Fln Alignment:

Contig580___EQLEFYLGETTASVQW----DCRVKPP---YESNDDMVQDQH*CPSGNDPVALNLFGMGKGVAWVNGKSIGRYWPSYIASQSGCTDSCDYRGAYSSSKCLTNCGQPSQKLYHVPRSWIQSTGNVLVLFEELGGDPTQISFVARSVGTVCARVSETHLPPVGSWKSSATSGLKVNKPKAELQLHCPSSGHLIKSIKFASFGTPTGRCGSFTYGHCNTNSTMSIIEEACIGRESCSVEVSIEKFGDPCRGTVKNLAVEASCS
A9NUR2________________EQLGIYSGDTKASAQWVAGSDLPTKQPMIWYKTNFD-------APSGNDPVALNLLGMGKGVAWVNGQSIGRYWPSYIASQSGCTDSCDYRGAYSSTKCQTNCGQPSQKLYHVPRSWIQPTGNVLVLFEELGGDPTQISFMTRSVGSLCAQVSETHLPPVDSWKSSATSGLEVNKPKAELQLHCPSSRHLIKSIKFASFGTSKGSCGSFTYGHCNTNSTMSIVEEACIGRESCSVEVSIEKFGDPCKGTVKNLAVEASCS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain