SustainPineDB

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Assembly info
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SNPs
SSRs
Descriptions
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ECs
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miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene233

Length: 753 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene233 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene12848	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	Amino acid transporter n=2 Tax=Populus trichocarpa RepID=B9N1V7_POPTR	-	-	56%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	65%
Blast2go	amino acid transporter	-	-	78%

Source	GOs	Term	Type	Identity
Blast2go	cellular response to ethylene stimulus	GO:0071369	Biological Process	78%
Blast2go	cellular response to iron ion	GO:0071281	Biological Process	78%
Blast2go	amino acid transport	GO:0006865	Biological Process	78%
Blast2go	cellular response to nitric oxide	GO:0071732	Biological Process	78%
Blast2go	amino acid transmembrane transporter activity	GO:0015171	Molecular Function	78%
Blast2go	vacuolar membrane	GO:0005774	Cellular Component	78%
Blast2go	integral to membrane	GO:0016021	Cellular Component	78%

Source	InterPros	Term	Type	e value	Identity
Sma3	Sodium:dicarboxylate symporter	IPR001991	-	0.0	-
Sma3	Amino acid transporter, transmembrane	IPR013057	-	0.0	-

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain