Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Retrotransposon gag protein

Term: IPR005162  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene72921 SustainPine v1.1 292
• AutoFact: Gag-protease polyprotein n=1 Tax=Cucumis melo RepID=Q84KB1_CUCME 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v1.1_unigene73531 SustainPine v1.1 382
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein n=1 Tax=Medicago truncatula RepID=Q2HW87_MEDTR 2.0e-06
• FL-Next: tr=RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v1.1_unigene82835 SustainPine v1.1 322
• AutoFact: Polyprotein n=1 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain