Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: DNA mismatch repair protein MutS-homologue MSH6

Term: IPR015536  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene1283 SustainPine v1.1 1626
AutoFact: DNA mismatch repair protein MSH6-2, putative n=1 Tax=Ricinus communis RepID=B9RKT8_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein Msh6-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh6- 0.0
C-terminus
sp_v1.1_unigene31392 SustainPine v1.1 761
AutoFact: DNA mismatch repair protein MSH6-2, putative n=1 Tax=Ricinus communis RepID=B9RKT8_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein Msh6-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh6- 0.0
Internal
sp_v1.1_unigene42039 SustainPine v1.1 426
AutoFact: MSH6; MSH6 (MUTS HOMOLOG 6); damaged DNA binding; K08737 DNA mismatch repair protein MSH6 3.9937e-43
FL-Next: sp=DNA mismatch repair protein Msh6-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 5.46506e-44
Internal
sp_v1.1_unigene42853 SustainPine v1.1 400
AutoFact: ATP binding protein, putative; K08737 DNA mismatch repair protein MSH6 1.0e-35
FL-Next: sp=DNA mismatch repair protein Msh6-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp binding 7.76999e-38
Internal
sp_v1.1_unigene50353 SustainPine v1.1 234
AutoFact: MSH7; DNA mismatch repair protein Msh6-2 2.0e-27
FL-Next: sp=DNA mismatch repair protein Msh6-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: mus2 protein 1.1949e-30
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain