Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: 3'-5' exonuclease domain

Term: IPR002562  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene2322 SustainPine v1.1 3087
AutoFact: 3'-5' exonuclease domain-containing protein / helicase and RNase D C-terminal domain-containing protein / HRDC domain-containing protein; K12591 exosome complex exonuclease RRP6 [EC:3.1.13.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3 -5 0.0
Putative Complete
sp_v1.1_unigene20002 SustainPine v1.1 1117
AutoFact: 3_5_exonuc domain containing protein 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 1.0195e-40
Complete
sp_v1.1_unigene23644 SustainPine v1.1 1378
AutoFact: 3-5 exonuclease, putative 6.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3 -5 exonuclease 0.0
Complete
sp_v1.1_unigene27691 SustainPine v1.1 1245
AutoFact: 3-5 exonuclease, putative 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-5 exonuclease nucleic acid binding protein 0.0
Complete
sp_v1.1_unigene29388 SustainPine v1.1 747
AutoFact: 3-5 exonuclease, putative n=1 Tax=Ricinus communis RepID=B9RFH0_RICCO 9.0e-06
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
C-terminus
sp_v1.1_unigene31812 SustainPine v1.1 355
AutoFact: 3'-5' exonuclease, putative n=1 Tax=Ricinus communis RepID=B9SDW9_RICCO 4.00001e-40
FL-Next: tr=Putative uncharacterized protein At2g32420; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rrp6-like protein 3 3.6849e-40
Internal
sp_v1.1_unigene33060 SustainPine v1.1 1214
AutoFact: 3-5 exonuclease, putative 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3 -5 exonuclease 0.0
Complete
sp_v1.1_unigene39702 SustainPine v1.1 679
AutoFact: WRNEXO; WRNEXO (WERNER SYNDROME-LIKE EXONUCLEASE); 3'-5' exonuclease/ nucleic acid binding / protein binding 6.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrnexo (werner syndrome-like exonuclease) 3 -5 exonuclease nucleic acid binding protein binding 1.52426e-33
Putative N-terminus
sp_v1.1_unigene42007 SustainPine v1.1 430
AutoFact: 3'-5' exonuclease-related 4.0e-09
FL-Next: sp=Werner Syndrome-like exonuclease; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v1.1_unigene48109 SustainPine v1.1 835
AutoFact: 3-5 exonuclease, putative 2.0e-32
FL-Next: tr=Os05g0357100 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: 3 -5 exonuclease domain-containing protein 1.96243e-32
Putative C-terminus
sp_v1.1_unigene55305 SustainPine v1.1 433
AutoFact: probable exonuclease mut-7 homolog 9.0e-09
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: at5g24340 4.67205e-19
Internal
sp_v1.1_unigene63245 SustainPine v1.1 536
AutoFact: DNA polymerase A family protein, putative n=3 Tax=Arabidopsis thaliana RepID=Q9C6J5_ARATH 0.0
FL-Next: tr=At1g50840/F8A12_8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene63993 SustainPine v1.1 309
AutoFact: 3-5 exonuclease, putative 1.0e-19
FL-Next: tr=3-5 exonuclease, putative; Ricinus communis (Castor bean). 0.0
Blast2go: 3 -5 exonuclease domain-containing protein 2.47424e-20
Internal
sp_v1.1_unigene84409 SustainPine v1.1 981
AutoFact: 3-5 exonuclease, putative 4.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3 -5 exonuclease 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain