Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Plant organelle RNA recognition domain

Term: IPR021099  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene11782 SustainPine v1.1 428
AutoFact: ubiquitin thiolesterase 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ubiquitin thiolesterase 5.70243e-17
N-terminus
sp_v1.1_unigene12471 SustainPine v1.1 532
AutoFact: ubiquitin thiolesterase 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 1.47129e-35
Internal
sp_v1.1_unigene18826 SustainPine v1.1 690
AutoFact: ubiquitin thiolesterase 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene32449 SustainPine v1.1 666
AutoFact: Plant-specific family protein RPD1 n=1 Tax=Arabidopsis thaliana RepID=Q689D6_ARATH 5.0e-31
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rpd1 (root primordium defective 1) ubiquitin thiolesterase 3.95863e-31
N-terminus
sp_v1.1_unigene44952 SustainPine v1.1 357
AutoFact: ubiquitin thiolesterase 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: ubiquitin thiolesterase 1.72006e-21
Internal
sp_v1.1_unigene48491 SustainPine v1.1 615
AutoFact: ubiquitin thiolesterase 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: ubiquitin thiolesterase 2.32491e-36
Internal
sp_v1.1_unigene52603 SustainPine v1.1 297
AutoFact: ubiquitin thiolesterase 1.0e-07
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain