Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: SWAP/Surp

Term: IPR000061  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene657 SustainPine v1.1 1131
AutoFact: spliceosome associated protein, putative; K12825 splicing factor 3A subunit 1 0.0
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene2481 SustainPine v1.1 974
AutoFact: Gene suppressor-of-white-apricot protein-like n=2 Tax=Oryza sativa RepID=Q5N8K0_ORYSJ 0.0
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swap (suppressor-of-white-apricot) surp domain-containing protein 0.0
N-terminus
sp_v1.1_unigene16294 SustainPine v1.1 2403
AutoFact: SWAP domain-containing protein-like protein (Fragment) n=5 Tax=Picea sitchensis RepID=E0ZI59_PICSI 0.0
FL-Next: sp=SURP and G-patch domain-containing protein 1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swap domain-containing protein 0.0
Complete
sp_v1.1_unigene18579 SustainPine v1.1 1246
AutoFact: arginine/serine rich splicing factor sf4/14, putative; K13096 splicing factor 4 1.00053e-42
FL-Next: sp=SURP and G-patch domain-containing protein 1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swap domain-containing protein 0.0
N-terminus
sp_v1.1_unigene19671 SustainPine v1.1 2242
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SPT4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene29366 SustainPine v1.1 2252
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SPT4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene36027 SustainPine v1.1 466
AutoFact: spliceosome associated protein, putative; K12825 splicing factor 3A subunit 1 5.0e-21
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 3.17012e-23
N-terminus
sp_v1.1_unigene41117 SustainPine v1.1 295
AutoFact: AGAP005953-PA; K12841 calcium homeostasis endoplasmic reticulum protein 6.0e-08
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 2.59323e-17
Internal
sp_v1.1_unigene48267 SustainPine v1.1 306
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RE60_RICCO 1.0e-18
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: rna binding 2.31145e-18
Internal
sp_v1.1_unigene64864 SustainPine v1.1 608
AutoFact: CHERP; calcium homeostasis endoplasmic reticulum protein; K12841 calcium homeostasis endoplasmic reticulum protein 6.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: PREDICTED: hypothetical protein [Vitis vinifera] 2.63884e-17
Putative C-terminus
sp_v1.1_unigene83433 SustainPine v1.1 751
AutoFact: Gene suppressor-of-white-apricot protein-like n=2 Tax=Oryza sativa RepID=Q5N8K0_ORYSJ 8.0e-24
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swap (suppressor-of-white-apricot) surp domain-containing protein 1.35614e-23
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain