Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Ribosomal protein L23/L15e core domain

Term: IPR012678  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene15860 SustainPine v1.1 1305
• AutoFact: 60S ribosomal protein L23A n=3 Tax=Magnoliophyta RepID=RL23A_FRIAG 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: x chain localization of the large subunit ribosomal proteins into a a cryo-em map of triticum aestivum translating 80s ribosome 0.0
Complete
sp_v1.1_unigene16199 SustainPine v1.1 1138
• AutoFact: 60S ribosomal protein L15-1 n=22 Tax=Embryophyta RepID=RL15A_PICMA 0.0
• FL-Next: sp=Ribosomal protein L15; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene23152 SustainPine v1.1 1090
• AutoFact: Ribosomal protein L23 family protein n=1 Tax=Solanum tuberosum RepID=Q38HS8_SOLTU 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene24154 SustainPine v1.1 404
• AutoFact: 40S ribosomal protein S24 n=3 Tax=Embryophyta RepID=A9NKN3_PICSI 6.0e-27
• FL-Next: sp=40S ribosomal protein S24; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 8.5402e-29
C-terminus
sp_v1.1_unigene24486 SustainPine v1.1 1263
• AutoFact: 60S ribosomal protein L15-1 n=22 Tax=Embryophyta RepID=RL15A_PICMA 0.0
• FL-Next: sp=Ribosomal protein L15; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene25853 SustainPine v1.1 902
• AutoFact: Ribosomal protein L23 family protein n=1 Tax=Solanum tuberosum RepID=Q38HS8_SOLTU 7.00005e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene58724 SustainPine v1.1 998
• AutoFact: 40S ribosomal protein S24 n=3 Tax=Embryophyta RepID=A9NKN3_PICSI 0.0
• FL-Next: sp=40S ribosomal protein S24; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene75840 SustainPine v1.1 595
• AutoFact: 60S ribosomal protein L23A n=3 Tax=Magnoliophyta RepID=RL23A_FRIAG 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein 0.0
Complete
sp_v1.1_unigene75940 SustainPine v1.1 661
• AutoFact: 60S ribosomal protein L23A n=3 Tax=Magnoliophyta RepID=RL23A_FRIAG 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: x chain localization of the large subunit ribosomal proteins into a a cryo-em map of triticum aestivum translating 80s ribosome 0.0
Complete
sp_v1.1_unigene80084 SustainPine v1.1 664
• AutoFact: 60S ribosomal protein L15-1 n=22 Tax=Embryophyta RepID=RL15A_PICMA 2.0e-25
• FL-Next: sp=Ribosomal protein L15; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.11525e-25
Complete
sp_v1.1_unigene80702 SustainPine v1.1 549
• AutoFact: 60S ribosomal protein L15-1 n=22 Tax=Embryophyta RepID=RL15A_PICMA 4.0e-34
• FL-Next: sp=Ribosomal protein L15; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 2.54601e-34
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain