Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: High mobility group, HMG1/HMG2

Term: IPR000910  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene2225 SustainPine v1.1 727
AutoFact: YABBY5 like protein (Fragment) n=1 Tax=Cabomba caroliniana RepID=Q5TM85_CABCA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yabby2 like protein 0.0
Complete
sp_v1.1_unigene2265 SustainPine v1.1 1254
AutoFact: transcription factor, putative 5.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Putative Complete
sp_v1.1_unigene2268 SustainPine v1.1 631
AutoFact: Transcription factor (Fragment) n=4 Tax=Lycoris longituba RepID=D6MKJ1_9ASPA 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 3.02497e-35
C-terminus
sp_v1.1_unigene8539 SustainPine v1.1 340
AutoFact: Unassigned protein 9.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene15613 SustainPine v1.1 1183
AutoFact: High mobility group protein B3 n=2 Tax=Physcomitrella patens RepID=A9Q9L0_9BRYO 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein 2.50832e-43
Complete
sp_v1.1_unigene16014 SustainPine v1.1 2084
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCQ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Complete
sp_v1.1_unigene16585 SustainPine v1.1 1065
AutoFact: DNA-binding protein MNB1B, putative n=1 Tax=Ricinus communis RepID=B9S139_RICCO 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hmg protein 2.01937e-25
C-terminus
sp_v1.1_unigene16838 SustainPine v1.1 1085
AutoFact: High mobility group protein B3 n=2 Tax=Physcomitrella patens RepID=A9Q9L0_9BRYO 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein 2.21405e-43
Complete
sp_v1.1_unigene22852 SustainPine v1.1 696
AutoFact: structure-specific recognition protein, putative (EC:1.3.1.74); K09272 structure-specific recognition protein 1 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 1.51517e-31
Putative Complete
sp_v1.1_unigene23238 SustainPine v1.1 552
AutoFact: structure-specific recognition protein, putative (EC:1.3.1.74); K09272 structure-specific recognition protein 1 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 1.31274e-32
Putative C-terminus
sp_v1.1_unigene37152 SustainPine v1.1 456
AutoFact: High mobility group B protein 15 n=2 Tax=Arabidopsis RepID=HMG15_ARATH 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Internal
sp_v1.1_unigene43429 SustainPine v1.1 735
AutoFact: YABBY5 like protein (Fragment) n=1 Tax=Cabomba caroliniana RepID=Q5TM85_CABCA 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yab5 transcription factor 0.0
Putative Complete
sp_v1.1_unigene79851 SustainPine v1.1 500
AutoFact: HMGB902; high mobility group family 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group box 1 protein 3.35293e-17
C-terminus
sp_v1.1_unigene84795 SustainPine v1.1 460
AutoFact: similar to F2D10.18; K10802 high mobility group protein B1 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 1.36033e-18
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain