Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: SWIB/MDM2 domain

Term: IPR003121  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene201 SustainPine v1.1 1032
AutoFact: [B] COG5531 SWIB-domain-containing proteins implicated in chromatin remodeling 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: brg-1 associated 0.0
C-terminus
sp_v1.1_unigene2103 SustainPine v1.1 1471
AutoFact: eukaryotic translation initiation factor SUI1 family protein 0.0
FL-Next: tr=Os02g0557600 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: eukaryotic translation initiation factor sui1 family protein 0.0
C-terminus
sp_v1.1_unigene14881 SustainPine v1.1 1057
AutoFact: [B] COG5531 SWIB-domain-containing proteins implicated in chromatin remodeling 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene16892 SustainPine v1.1 2041
AutoFact: Upstream activation factor subunit UAF30, putative n=1 Tax=Ricinus communis RepID=B9S8L0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swib mdm2 domain containing protein 0.0
Complete
sp_v1.1_unigene21862 SustainPine v1.1 923
AutoFact: SWIb domain-containing protein (Fragment) n=1 Tax=Solanum chacoense RepID=Q6V9I4_SOLCH 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swib complex baf60b domain-containing protein 1.07947e-29
Complete
sp_v1.1_unigene22051 SustainPine v1.1 687
AutoFact: SWIB complex BAF60b domain-containing protein 6.0e-09
FL-Next: tr=At4g26810; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v1.1_unigene25995 SustainPine v1.1 928
AutoFact: SWIB complex BAF60b domain-containing protein 8.0e-23
FL-Next: tr=At4g26810; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swib complex baf60b domain-containing protein 1.52833e-23
Complete
sp_v1.1_unigene26543 SustainPine v1.1 854
AutoFact: Upstream activation factor subunit UAF30, putative n=1 Tax=Ricinus communis RepID=B9S8L0_RICCO 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swib mdm2 domain containing protein 2.17619e-26
C-terminus
sp_v1.1_unigene27887 SustainPine v1.1 1000
AutoFact: [B] COG5531 SWIB-domain-containing proteins implicated in chromatin remodeling 7.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain