Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: Zinc finger, LSD1-type

Term: IPR005735  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene14488 SustainPine v1.1 860
• AutoFact: PREDICTED: similar to LOL3 (LSD ONE LIKE 3); caspase/ cysteine-type endopeptidase n=1 Tax=Vitis vinifera RepID=UPI0001984E81 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: metacaspase 1 0.0
N-terminus
sp_v1.1_unigene25914 SustainPine v1.1 1582
• AutoFact: PREDICTED: similar to LOL3 (LSD ONE LIKE 3); caspase/ cysteine-type endopeptidase n=1 Tax=Vitis vinifera RepID=UPI0001984E81 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: metacaspase 1 0.0
Complete
sp_v1.1_unigene26015 SustainPine v1.1 1607
• AutoFact: PREDICTED: similar to LOL3 (LSD ONE LIKE 3); caspase/ cysteine-type endopeptidase n=1 Tax=Vitis vinifera RepID=UPI0001984E81 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: metacaspase 1 0.0
Complete
sp_v1.1_unigene55922 SustainPine v1.1 283
• AutoFact: Metacaspase-1 n=1 Tax=Arabidopsis thaliana RepID=MCA1_ARATH 1.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain