Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: RNA polymerase II, large subunit, CTD

Term: IPR006569  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene1682 SustainPine v1.1 1340
• AutoFact: RNA binding protein, putative; K12842 U2-associated protein SR140 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene7774 SustainPine v1.1 786
• AutoFact: DUF618 domain containing protein 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: unnamed protein product [Vitis vinifera] 0.0
N-terminus
sp_v1.1_unigene13552 SustainPine v1.1 614
• AutoFact: Glutathione peroxidase n=1 Tax=Ricinus communis RepID=B9T4A6_RICCO 3.9937e-43
• FL-Next: sp=Glutathione peroxidase; Ricinus communis (Castor bean). 0.0
• Blast2go: pwwp domain-containing protein 6.33387e-43
Internal
sp_v1.1_unigene14410 SustainPine v1.1 524
• AutoFact: PCFS4; PCFS4 (PCF11P-SIMILAR PROTEIN 4); zinc ion binding 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: protein 2.79067e-28
Putative N-terminus
sp_v1.1_unigene18476 SustainPine v1.1 861
• AutoFact: HUA2; HUA2 (ENHANCER OF AG-4 2); transcription factor 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: pwwp domain-containing protein 0.0
Internal
sp_v1.1_unigene19671 SustainPine v1.1 2242
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SPT4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene29366 SustainPine v1.1 2252
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SPT4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene40436 SustainPine v1.1 116
• AutoFact: RNA binding protein, putative; K12842 U2-associated protein SR140 1.0e-07
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain