Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: Alpha tubulin

Term: IPR002452  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene9854 SustainPine v1.1 1098
AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin alpha-3 chain 0.0
N-terminus
sp_v1.1_unigene13321 SustainPine v1.1 321
AutoFact: Alhpa-tubulin 3 n=1 Tax=Reticulomyxa filosa RepID=O44024_RETFI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha tubulin 0.0
Internal
sp_v1.1_unigene23382 SustainPine v1.1 2160
AutoFact: Tubulin alpha-2/alpha-4 chain n=118 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-tubulin 0.0
Complete
sp_v1.1_unigene24531 SustainPine v1.1 2018
AutoFact: Tubulin alpha-2/alpha-4 chain n=118 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
Blast2go: alpha tubulin 1 0.0
Complete
sp_v1.1_unigene24798 SustainPine v1.1 1139
AutoFact: tubulin alpha chain, putative; K07374 tubulin alpha 0.0
FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
Blast2go: alpha tubulin 1 0.0
Putative Complete
sp_v1.1_unigene25802 SustainPine v1.1 1454
AutoFact: Tubulin alpha-2/alpha-4 chain n=118 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha tubulin 1 0.0
N-terminus
sp_v1.1_unigene36114 SustainPine v1.1 1831
AutoFact: Tubulin alpha-2/alpha-4 chain n=118 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha tubulin 1 0.0
Complete
sp_v1.1_unigene43376 SustainPine v1.1 544
AutoFact: Alpha-tubulin (Fragment) n=2 Tax=Eukaryota RepID=Q5FBW0_9STRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-tubulin 0.0
Internal
sp_v1.1_unigene71557 SustainPine v1.1 410
AutoFact: Alpha tubulin (Fragment) n=1 Tax=Porphyra yezoensis RepID=Q002F9_PORYE 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene75809 SustainPine v1.1 930
AutoFact: Alpha-2 tubulin (Fragment) n=2 Tax=Magnoliophyta RepID=Q0P6N8_PLAMJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha tubulin 0.0
C-terminus
sp_v1.1_unigene79134 SustainPine v1.1 556
AutoFact: Alpha-2 tubulin (Fragment) n=2 Tax=Magnoliophyta RepID=Q0P6N8_PLAMJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha tubulin 0.0
C-terminus
sp_v1.1_unigene79345 SustainPine v1.1 1447
AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha tubulin 1 0.0
Complete
sp_v1.1_unigene79792 SustainPine v1.1 734
AutoFact: Alpha-tubulin 2 (Fragment) n=1 Tax=Myxine glutinosa RepID=Q8MVT1_MYXGL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-tubulin 0.0
Putative C-terminus
sp_v1.1_unigene80770 SustainPine v1.1 691
AutoFact: PREDICTED: similar to tubulin, alpha 1 isoform 3 n=1 Tax=Canis lupus familiaris RepID=UPI00005A4BE8 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha tubulin 1 0.0
N-terminus
sp_v1.1_unigene80862 SustainPine v1.1 649
AutoFact: Tubulin alpha-2/alpha-4 chain n=118 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha tubulin 1 0.0
Putative Complete
sp_v1.1_unigene80866 SustainPine v1.1 673
AutoFact: Tubulin alpha-2/alpha-4 chain n=118 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
Blast2go: alpha tubulin 1 0.0
Putative C-terminus
sp_v1.1_unigene81044 SustainPine v1.1 969
AutoFact: Tubulin alpha-2/alpha-4 chain n=118 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha tubulin 1 0.0
N-terminus
sp_v1.1_unigene81144 SustainPine v1.1 780
AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-1C chain-like n=1 Tax=Macaca mulatta RepID=UPI0001D53D82 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin alpha 0.0
Putative N-terminus
sp_v1.1_unigene81270 SustainPine v1.1 372
AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Camellia sinensis RepID=Q646H4_CAMSI 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin alpha 7.23191e-34
C-terminus
sp_v1.1_unigene81302 SustainPine v1.1 921
AutoFact: Tubulin alpha-2/alpha-4 chain n=118 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
Blast2go: alpha tubulin 1 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain